Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 AL645939.1-201ENST00000453429 797 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 RPL38P1-201ENST00000460914 211 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF6Q9Y252 GAPDHP36-201ENST00000480688 918 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 RPS27P23-201ENST00000487608 251 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 AC110792.1-201ENST00000491826 472 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 RPL7P24-201ENST00000493052 752 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 AC092045.1-201ENST00000495716 1231 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF6Q9Y252 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 HSPE1P5-201ENST00000561489 272 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 EIF5A2P1-201ENST00000564027 460 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 AL133457.1-201ENST00000564251 987 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 MTND4LP25-201ENST00000570218 163 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 AC120057.2-201ENST00000571520 271 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 AC124283.4-201ENST00000581815 456 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 AC017100.2-201ENST00000584628 355 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 MTATP6P2-201ENST00000603319 678 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 YWHAQP7-201ENST00000603536 658 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 AL591424.2-201ENST00000617023 128 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 MIR6075-201ENST00000620782 95 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 AC008725.1-201ENST00000605123 2263 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF6Q9Y252 DCAF13P1-201ENST00000495256 1330 ntBASIC3.68□□□□□ -1.82
RNF6Q9Y252 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF6Q9Y252 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 NMD3P1-201ENST00000439704 1488 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC095050.2-201ENST00000510748 1458 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC107081.3-201ENST00000612715 2034 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF6Q9Y252 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF6Q9Y252 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 U6.112-201ENST00000384129 70 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 MIR200C-201ENST00000384980 68 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 ATP5F1P4-201ENST00000397288 746 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 BTBD10P2-201ENST00000404779 676 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 PAICSP7-201ENST00000419829 962 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC241520.1-201ENST00000422654 1099 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AL691449.1-201ENST00000426570 421 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 AL512637.2-201ENST00000431287 1256 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AL358472.1-201ENST00000431295 329 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AL513175.1-201ENST00000431492 780 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 EXTL2P1-201ENST00000446218 416 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 MTCO3P16-201ENST00000454456 754 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 MTCO3P20-201ENST00000454926 688 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 SNORD108-201ENST00000459332 71 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 snoU13.22-201ENST00000459428 104 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 RN7SL271P-201ENST00000487601 295 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC004069.2-201ENST00000505438 1114 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 IGJP1-201ENST00000522682 475 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 CBX3P5-201ENST00000552017 521 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC099489.2-201ENST00000574976 260 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 Z82195.1-201ENST00000604558 398 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 uc_338.32-201ENST00000615087 172 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC078880.5-201ENST00000617845 421 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 MIR4496-201ENST00000635896 61 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC116667.1-201ENST00000604855 2072 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF6Q9Y252 AC006504.1-201ENST00000562493 3666 ntBASIC3.67□□□□□ -1.82
RNF6Q9Y252 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF6Q9Y252 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF6Q9Y252 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RNF6Q9Y252 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms