Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 AC062016.1-201ENST00000355719 319 ntBASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 MIR30E-201ENST00000362104 92 ntBASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 BTF3P9-201ENST00000418784 283 ntBASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 AC139713.2-210ENST00000641741 992 ntBASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 AC104446.1-201ENST00000613728 1321 ntBASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHANK2Q9UPX8 SNORD67-201ENST00000390833 111 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 RANP4-201ENST00000413361 655 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 RPS12P5-201ENST00000423449 371 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 CST9LP2-201ENST00000437612 320 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 MRPS31P2-201ENST00000451581 518 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 RPL12P26-201ENST00000452430 487 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AC117440.1-201ENST00000474107 571 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AP001636.2-201ENST00000525517 696 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 MIR4435-1-201ENST00000582552 80 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AL359535.1-201ENST00000612100 1087 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AL645568.2-201ENST00000432815 1337 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 RN7SKP220-201ENST00000410611 288 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 FGF7P3-201ENST00000454645 303 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 IGLVIV-53-201ENST00000520107 367 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AC018552.3-201ENST00000567416 561 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 AC099506.2-201ENST00000623074 221 ntBASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.69□□□□□ -1.66
SHANK2Q9UPX8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 RPL7P8-201ENST00000411964 730 ntBASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 AL589765.3-201ENST00000446084 462 ntBASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 RNU1-41P-201ENST00000516161 162 ntBASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 RNU1-48P-201ENST00000516400 162 ntBASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 MIR4319-201ENST00000577285 85 ntBASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 PRELID3BP8-201ENST00000604148 295 ntBASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 AC245100.7-201ENST00000609678 442 ntBASIC4.68□□□□□ -1.66
SHANK2Q9UPX8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 RIOK3P1-201ENST00000418778 1528 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 NUP35P1-201ENST00000422734 947 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 GLRXP1-201ENST00000423261 334 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 RPS12P18-201ENST00000442381 270 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 AC017037.2-201ENST00000513850 890 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 RNU1-143P-201ENST00000516296 146 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 AL096803.3-201ENST00000609032 532 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 U1.23-201ENST00000610293 146 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 RNU1-68P-201ENST00000615382 146 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 LINC00901.1-201ENST00000617252 152 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 U1.39-201ENST00000621562 146 ntBASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHANK2Q9UPX8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 AC027287.1-201ENST00000553115 1453 ntBASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 RPL7P25-201ENST00000404151 721 ntBASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 TXNP1-201ENST00000441872 371 ntBASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 AL139174.1-201ENST00000531489 886 ntBASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 AC073476.4-201ENST00000628409 72 ntBASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 AL672296.1-201ENST00000427780 2158 ntBASIC4.66□□□□□ -1.66
SHANK2Q9UPX8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 AL513124.1-201ENST00000450410 614 ntBASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 FDX1P2-201ENST00000450769 375 ntBASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 UBL5P3-201ENST00000475112 231 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms