Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AC006213.6-201ENST00000623722 4179 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 RNU6-179P-201ENST00000363350 107 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 Y_RNA.418-201ENST00000384029 102 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 RNU6-95P-201ENST00000384697 107 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AC010154.1-201ENST00000425857 269 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AC108479.1-201ENST00000431142 427 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AC004866.2-201ENST00000438285 481 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AC116533.1-201ENST00000459748 321 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AC098869.1-201ENST00000481627 292 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 EEF1A1P25-201ENST00000495704 1267 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 DEFB108E-201ENST00000524692 240 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AC009120.3-201ENST00000563335 499 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 VN1R91P-201ENST00000594377 169 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AC103710.2-201ENST00000609912 942 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AL161423.1-201ENST00000613700 262 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AL591926.1-201ENST00000620542 217 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 MIR6806-201ENST00000622141 64 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 AL391262.1-201ENST00000556558 1992 ntBASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 TMEM75-201ENST00000624314 2165 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 RNU6-1059P-201ENST00000363752 98 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 U3.11-201ENST00000364476 212 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AL138885.1-201ENST00000405921 675 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 RPS27AP3-201ENST00000453803 454 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AL035090.1-201ENST00000454835 332 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 RPL7P6-201ENST00000480903 738 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 RPS24P16-201ENST00000497294 392 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 RAB9BP1-201ENST00000519581 626 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 MIR3144-201ENST00000579460 79 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 RN7SL230P-201ENST00000580835 303 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 Z83818.1-201ENST00000603584 150 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AC124916.2-201ENST00000604416 224 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 MIR7159-201ENST00000620587 66 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AC073488.6-201ENST00000632293 754 ntBASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM35Q9UPQ4 AC104162.1-201ENST00000430831 2382 ntBASIC8.22□□□□□ -1.09
TRIM35Q9UPQ4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
TRIM35Q9UPQ4 AP004289.1-201ENST00000436307 2205 ntBASIC8.22□□□□□ -1.09
TRIM35Q9UPQ4 HSPA8P1-201ENST00000425843 1833 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms