Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.46□□□□□ -1.86
TREX1Q9NSU2 RBMY2UP-201ENST00000453474 324 ntBASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AC004801.2-202ENST00000463559 283 ntBASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AC146507.1-201ENST00000468335 354 ntBASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AC110792.2-201ENST00000510278 224 ntBASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AC104619.4-201ENST00000510773 249 ntBASIC3.46□□□□□ -1.86
TREX1Q9NSU2 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AC011602.1-201ENST00000546484 331 ntBASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AL592295.2-201ENST00000612578 206 ntBASIC3.46□□□□□ -1.86
TREX1Q9NSU2 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AC009093.8-201ENST00000641769 292 ntBASIC3.46□□□□□ -1.86
TREX1Q9NSU2 AC138915.3-201ENST00000562908 1389 ntBASIC3.46□□□□□ -1.86
TREX1Q9NSU2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TREX1Q9NSU2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AL365440.1-201ENST00000436135 2167 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 MTND5P3-201ENST00000438536 1800 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC091152.2-201ENST00000591628 2569 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 RNU6-452P-201ENST00000384406 107 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 SNORA70E-201ENST00000384492 135 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AL445189.1-201ENST00000405722 338 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 CRYBB2P1-203ENST00000415709 538 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AL160175.1-201ENST00000428124 247 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC007389.2-201ENST00000434630 306 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC239367.2-201ENST00000447309 705 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC010401.1-201ENST00000463867 348 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 RN7SL330P-201ENST00000469709 307 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC106707.2-201ENST00000484182 374 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC090543.1-201ENST00000492168 485 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 SUMO1P1-201ENST00000497904 306 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC110768.1-201ENST00000509222 400 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC093770.1-201ENST00000511559 571 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 MTND4LP31-201ENST00000514859 294 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AP001636.2-201ENST00000525517 696 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC103843.2-201ENST00000530523 682 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC115085.1-201ENST00000588924 229 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC093227.2-201ENST00000589357 285 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AL034351.1-201ENST00000605288 668 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 MIR7851-201ENST00000610611 160 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 AC039056.2-201ENST00000622261 511 ntBASIC3.45□□□□□ -1.86
TREX1Q9NSU2 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
TREX1Q9NSU2 MTCO1P8-201ENST00000416914 1523 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 RN7SKP285-201ENST00000410137 318 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AC069218.2-201ENST00000411665 344 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 RANP4-201ENST00000413361 655 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AL512504.1-201ENST00000415494 778 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 RPL23AP82-202ENST00000427528 469 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AC023347.2-201ENST00000433994 462 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 MRPS33P4-201ENST00000434892 317 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 CENPBD1P1-201ENST00000464061 469 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 TRBV8-2-201ENST00000475637 270 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AC107398.1-201ENST00000486904 505 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 RNU6-889P-201ENST00000517189 103 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms