Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC005668.1-201ENST00000571142 476 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 MIR4311-201ENST00000580794 100 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL353997.4-201ENST00000586196 166 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC090948.1-201ENST00000607464 549 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 MIR6809-201ENST00000612189 116 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 MIR6736-201ENST00000616799 59 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC138305.3-201ENST00000624988 240 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 CR381572.1-201ENST00000625098 102 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL078621.3-201ENST00000623707 2042 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC133552.1-201ENST00000569988 4007 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL118496.1-201ENST00000440201 1812 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC068870.1-201ENST00000563737 2455 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 MTND5P33-201ENST00000571250 1450 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC104964.3-201ENST00000606115 2860 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSU72Q9NP77 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 RNA5SP394-201ENST00000364216 119 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 RNU6-441P-201ENST00000384545 106 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 RNU6-831P-201ENST00000384548 107 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSU72Q9NP77 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSU72Q9NP77 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 PRELID3BP11-201ENST00000414230 479 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC127526.1-201ENST00000417526 366 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AP000936.3-201ENST00000438127 255 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AL353662.1-201ENST00000439099 327 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC005077.1-201ENST00000449226 375 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 AL163973.1-201ENST00000484753 577 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 NPM1P41-201ENST00000512920 831 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 BTF3P13-201ENST00000513224 490 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 PRMT5P1-201ENST00000514351 598 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 RNU6-1046P-201ENST00000516538 107 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 Y_RNA.711-201ENST00000516993 102 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 RNA5SP337-201ENST00000517007 109 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 OR4T1P-201ENST00000554933 911 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AL355836.1-201ENST00000555951 870 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC092332.1-201ENST00000563684 829 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC136443.5-201ENST00000603741 370 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC012368.3-201ENST00000604190 219 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC124303.1-201ENST00000605703 360 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC243654.2-201ENST00000612843 443 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AL158196.1-201ENST00000616786 434 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC241377.1-201ENST00000619797 406 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC040168.1-201ENST00000623594 991 ntBASIC5.59□□□□□ -1.51
SSU72Q9NP77 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSU72Q9NP77 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSU72Q9NP77 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSU72Q9NP77 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSU72Q9NP77 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSU72Q9NP77 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SSU72Q9NP77 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.52
SSU72Q9NP77 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms