Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 Y_RNA.72-201ENST00000362894 103 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-251P-201ENST00000363235 104 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 RNA5SP234-201ENST00000363916 119 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 RPS20P2-201ENST00000402520 389 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AL356432.1-201ENST00000405809 419 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 MIR1305-201ENST00000408300 86 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 GPS2P1-201ENST00000411761 986 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 OR9R1P-201ENST00000412200 877 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 RPL7P57-201ENST00000423238 740 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 NDUFB4P8-201ENST00000435351 367 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 CALM1P1-201ENST00000442082 433 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC019185.1-201ENST00000442718 389 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AL450023.1-201ENST00000450868 751 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 NIPA2P2-201ENST00000496376 1083 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 RN7SL466P-201ENST00000497546 295 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 FGF7P4-201ENST00000509595 295 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC034159.1-201ENST00000513885 583 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-202P-201ENST00000515998 96 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC243972.3-201ENST00000539655 198 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC068993.1-201ENST00000546724 589 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 SUB1P2-201ENST00000556401 297 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC034105.3-201ENST00000565294 442 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 RN7SL753P-201ENST00000581238 290 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 LLPHP1-201ENST00000603571 367 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC013553.2-201ENST00000604244 589 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC009027.1-201ENST00000604510 479 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AL365204.3-201ENST00000612448 685 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 uc_338.7-201ENST00000621834 124 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AL160413.1-201ENST00000622780 310 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AL158801.5-201ENST00000623123 465 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 NMD3P1-201ENST00000439704 1488 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC097063.1-201ENST00000426714 1797 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 LINC00561-201ENST00000565815 2738 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 OR5J1P-201ENST00000313544 939 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 OR9K1P-201ENST00000326513 941 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 SNORA51.1-201ENST00000363243 140 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 Y_RNA.159-201ENST00000363674 87 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 RNY3P3-201ENST00000363816 102 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 RNU4-2-201ENST00000365668 141 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 Y_RNA.481-201ENST00000384373 102 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC068050.1-201ENST00000394891 380 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 Z97832.1-201ENST00000402490 328 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 RNU2-6P-201ENST00000411404 190 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC127391.1-201ENST00000411737 98 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 SNRPEP10-201ENST00000420249 274 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 MTND2P23-201ENST00000422990 651 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 MTCO2P12-201ENST00000427426 682 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC018644.1-201ENST00000429934 551 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC022022.1-201ENST00000430304 178 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 CBX1P1-201ENST00000440184 427 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC140076.1-201ENST00000449897 361 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 RNU7-136P-201ENST00000458819 69 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 RPL23AP12-201ENST00000467573 473 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC013356.1-201ENST00000489027 564 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms