Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 RNA5SP362-201ENST00000516048 118 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 SNORA43.3-201ENST00000517240 103 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 RPL21P12-201ENST00000559810 515 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 BGLT3-201ENST00000564523 994 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC005341.1-201ENST00000571086 708 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 FKBP1AP1-201ENST00000594588 318 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC099494.2-201ENST00000623371 978 ntBASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.34□□□□□ -1.39
TRAIPQ9BWF2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
TRAIPQ9BWF2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.34□□□□□ -1.4
TRAIPQ9BWF2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AL356489.2-201ENST00000566968 3528 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC108751.5-201ENST00000492880 1336 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 RNU6-223P-201ENST00000362830 107 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 RNU11-201ENST00000387069 134 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC092832.1-201ENST00000422934 400 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AL590399.2-201ENST00000427536 309 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 GPR143P-201ENST00000434155 205 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 RPS4XP4-201ENST00000443195 763 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 MTND2P24-201ENST00000453434 806 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 RPS26P39-201ENST00000469206 341 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC009120.1-201ENST00000493458 473 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC097173.1-201ENST00000505862 819 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 NRBF2P4-201ENST00000520874 850 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 IGLV3-30-201ENST00000524362 298 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC126615.2-201ENST00000553003 515 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AL157687.1-201ENST00000554853 619 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC068790.5-201ENST00000602741 355 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AL360012.1-201ENST00000602813 131 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AL139286.1-201ENST00000604465 483 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC008966.2-201ENST00000606157 453 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AL603758.1-201ENST00000618654 241 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 MIR3688-2-201ENST00000636963 87 ntBASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRAIPQ9BWF2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AL078621.3-201ENST00000623707 2042 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 RNU6-1097P-201ENST00000363586 107 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 RNY4P14-201ENST00000363656 96 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 Y_RNA.409-201ENST00000383990 98 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 RN7SKP247-201ENST00000411094 308 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 USP9YP27-201ENST00000418455 438 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 BX510359.3-201ENST00000422168 306 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC092162.1-201ENST00000432828 434 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC000111.3-201ENST00000433478 193 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 HMGB3P12-201ENST00000438745 556 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC023141.8-201ENST00000442554 208 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AL450996.1-201ENST00000445574 1202 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 AC079781.2-201ENST00000446424 169 ntBASIC6.32□□□□□ -1.4
TRAIPQ9BWF2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms