Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX3Q99909 AC000367.1-201ENST00000452711 1766 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 OR56B2P-202ENST00000641377 2453 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 MAPK10-373ENST00000641983 6772 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSX3Q99909 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX3Q99909 MAPK10-253ENST00000641010 4072 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SSX3Q99909 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SSX3Q99909 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSX3Q99909 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX3Q99909 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSX3Q99909 AL133383.2-201ENST00000622958 2336 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSX3Q99909 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSX3Q99909 AC021146.4-201ENST00000309229 279 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 RNA5SP447-201ENST00000363749 119 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 RNU6-629P-201ENST00000384061 103 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 SNORD116-23-201ENST00000384645 92 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 SDHCP2-201ENST00000398565 501 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 AL079342.2-201ENST00000403367 482 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 AL449283.1-202ENST00000418249 604 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 RPS27AP7-201ENST00000422792 455 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 OSTCP5-201ENST00000425293 453 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 RPEP3-201ENST00000425462 676 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 NIPA2P1-201ENST00000426223 976 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSX3Q99909 C4BPAP2-201ENST00000428434 478 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 RPL23AP93-201ENST00000440847 484 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 MTCO1P53-201ENST00000441633 699 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 AC007537.2-201ENST00000472093 511 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 TRAV31-201ENST00000502780 342 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.69□□□□□ -1.82
SSX3Q99909 AC034205.1-201ENST00000520621 638 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 AP004371.1-201ENST00000525240 214 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.69□□□□□ -1.82
SSX3Q99909 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.69□□□□□ -1.82
SSX3Q99909 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX3Q99909 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.69□□□□□ -1.82
SSX3Q99909 AC084783.1-201ENST00000565846 910 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 CYP4A43P-201ENST00000568156 121 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX3Q99909 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX3Q99909 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX3Q99909 AL034351.1-201ENST00000605288 668 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 AC024060.1-201ENST00000607052 494 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX3Q99909 AL354976.1-201ENST00000613843 387 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 AC098679.5-201ENST00000624394 571 ntBASIC3.69□□□□□ -1.82
SSX3Q99909 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX3Q99909 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSX3Q99909 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSX3Q99909 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.69□□□□□ -1.82
SSX3Q99909 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSX3Q99909 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSX3Q99909 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSX3Q99909 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSX3Q99909 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.69□□□□□ -1.82
SSX3Q99909 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX3Q99909 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX3Q99909 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SSX3Q99909 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX3Q99909 SNORA51.2-201ENST00000364595 132 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 SNORA62-201ENST00000365493 153 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AL133264.1-201ENST00000407157 562 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.68□□□□□ -1.82
SSX3Q99909 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.68□□□□□ -1.82
SSX3Q99909 OFD1P18Y-201ENST00000420889 959 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 COX6CP17-201ENST00000421389 185 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 RPL18P10-201ENST00000425606 538 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 AL356276.2-201ENST00000435919 558 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX3Q99909 ISCUP1-201ENST00000454451 448 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.68□□□□□ -1.82
SSX3Q99909 RPL23AP62-201ENST00000463396 453 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AC104164.3-201ENST00000467363 1258 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AC069528.1-202ENST00000482888 637 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.68□□□□□ -1.82
SSX3Q99909 MTCO3P44-201ENST00000510977 541 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AC093840.1-201ENST00000511599 336 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 RNU6-1073P-201ENST00000517182 106 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.68□□□□□ -1.82
SSX3Q99909 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.68□□□□□ -1.82
SSX3Q99909 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SSX3Q99909 OR4A45P-201ENST00000529954 901 ntBASIC3.68□□□□□ -1.82
SSX3Q99909 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.68□□□□□ -1.82
SSX3Q99909 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.68□□□□□ -1.82
SSX3Q99909 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSX3Q99909 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms