Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 SNX5P1-201ENST00000505757 1041 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 MTATP6P22-201ENST00000507369 598 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 AC026412.2-201ENST00000512270 1075 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP88Q99567 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.27□□□□□ -1.57
NUP88Q99567 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP88Q99567 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP88Q99567 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP88Q99567 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.27□□□□□ -1.57
NUP88Q99567 AC074029.1-201ENST00000552531 1044 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 AC007954.1-201ENST00000554198 494 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 AL390334.1-201ENST00000556395 450 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP88Q99567 AC136624.4-201ENST00000573044 370 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 MIR3138-201ENST00000585238 82 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP88Q99567 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP88Q99567 OR2AS2P-201ENST00000606902 342 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 AL392048.1-201ENST00000613946 534 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 AC231657.1-201ENST00000624313 397 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP88Q99567 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
NUP88Q99567 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NUP88Q99567 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 AC092435.4-201ENST00000623012 4159 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 SNORD116-1-201ENST00000384335 95 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 MIR649-201ENST00000384843 97 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 VDAC2P1-201ENST00000399358 958 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 AC069218.2-201ENST00000411665 344 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 SETP15-201ENST00000412724 337 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.26□□□□□ -1.57
NUP88Q99567 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP88Q99567 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP88Q99567 MTND4P32-201ENST00000437189 1237 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 MTCYBP39-201ENST00000437562 491 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 RPL23AP43-201ENST00000446445 471 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.26□□□□□ -1.57
NUP88Q99567 AL591623.2-201ENST00000449978 222 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP88Q99567 APOOP2-201ENST00000461561 539 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 AC092754.2-201ENST00000463506 460 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 RN7SL41P-201ENST00000476144 297 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 AC068587.1-201ENST00000483613 781 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 RPS4XP18-201ENST00000495480 763 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.26□□□□□ -1.57
NUP88Q99567 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP88Q99567 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP88Q99567 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP88Q99567 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP88Q99567 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP88Q99567 MTCYBP28-201ENST00000566728 1132 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 AC135628.1-201ENST00000568867 534 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 AC015912.2-201ENST00000571053 181 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 AC107982.3-201ENST00000584957 985 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 AC110760.3-201ENST00000598794 467 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 AL358072.1-201ENST00000604156 575 ntBASIC5.26□□□□□ -1.57
NUP88Q99567 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NUP88Q99567 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP88Q99567 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP88Q99567 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NUP88Q99567 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUP88Q99567 AC007529.1-201ENST00000418574 2178 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP88Q99567 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NUP88Q99567 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.25□□□□□ -1.57
NUP88Q99567 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NUP88Q99567 MAPK10-303ENST00000641324 3959 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NUP88Q99567 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP88Q99567 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUP88Q99567 RNA5SP479-201ENST00000364858 117 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP88Q99567 SNORD96B-201ENST00000386148 79 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 SNORA68.2-201ENST00000391263 128 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 RPL23AP29-201ENST00000397284 453 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AL021407.1-201ENST00000404531 386 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AL023807.1-201ENST00000407932 359 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP88Q99567 RPS29P17-201ENST00000430795 166 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AL590103.1-201ENST00000434488 307 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP88Q99567 ELOCP8-201ENST00000439309 332 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 MTND2P20-201ENST00000440805 661 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 ELOCP15-201ENST00000442090 332 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms