Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC063949.1-201ENST00000552900 865 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 EIF5A2P1-201ENST00000564027 460 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC091042.1-201ENST00000579213 173 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 AL512782.1-201ENST00000603093 364 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC087783.2-201ENST00000605070 562 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC024560.3-201ENST00000608482 349 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS50Q96JG6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
VPS50Q96JG6 AC012618.3-205ENST00000637896 1496 ntBASIC4.67□□□□□ -1.66
VPS50Q96JG6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS50Q96JG6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS50Q96JG6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS50Q96JG6 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 DHX9P1-201ENST00000436565 3076 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS50Q96JG6 USP9YP4-201ENST00000424401 1745 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC009643.2-201ENST00000603543 1448 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AL672167.1-206ENST00000356293 943 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 Y_RNA.25-201ENST00000362528 102 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 RNU6-251P-201ENST00000363235 104 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 RNU6-374P-201ENST00000364146 108 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 RNU6-660P-201ENST00000364566 109 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS50Q96JG6 RNU6-657P-201ENST00000383904 107 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 MIR195-201ENST00000385194 87 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 MIR298-201ENST00000401212 88 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AL078604.1-201ENST00000404609 466 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 USP9YP33-201ENST00000412220 421 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS50Q96JG6 IFNNP1-201ENST00000429219 553 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 USP9YP35-201ENST00000435696 412 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 AL353706.1-201ENST00000436728 494 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 EEF1A1P1-201ENST00000447052 739 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 RPL18AP17-201ENST00000455326 198 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 ARPC3P2-201ENST00000457786 533 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC006967.1-201ENST00000467608 589 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC010424.1-201ENST00000506336 297 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 Y_RNA.719-201ENST00000517156 106 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC027309.2-201ENST00000520566 192 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC106038.2-201ENST00000520706 568 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AC073544.2-201ENST00000601155 540 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 AL031320.1-201ENST00000604177 357 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 AP005432.2-201ENST00000608162 586 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AL133412.1-201ENST00000380194 2992 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS50Q96JG6 AL359922.3-201ENST00000624779 1670 ntBASIC4.66□□□□□ -1.66
VPS50Q96JG6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS50Q96JG6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VPS50Q96JG6 MTND5P24-201ENST00000438892 1767 ntBASIC4.65□□□□□ -1.66
VPS50Q96JG6 AC068254.2-201ENST00000623938 3577 ntBASIC4.65□□□□□ -1.66
VPS50Q96JG6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
VPS50Q96JG6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS50Q96JG6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 SNORA77-201ENST00000408716 125 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms