Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC092140.2-201ENST00000618027 521 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC092650.2-201ENST00000619984 902 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 RNU6-156P-201ENST00000621869 107 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 MIR6715B-201ENST00000637172 77 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 OR5BR1P-201ENST00000524992 1330 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5RAP3Q96JB5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 Y_RNA.18-201ENST00000362461 102 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 RNU6-216P-201ENST00000363282 104 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 RNU6-1122P-201ENST00000384449 107 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 RNU6-920P-201ENST00000410926 92 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC004987.3-201ENST00000413879 771 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC098826.1-201ENST00000433943 471 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 MTCYBP39-201ENST00000437562 491 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 MTND4LP3-201ENST00000468320 276 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC072039.1-201ENST00000477611 581 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC108022.1-201ENST00000493466 478 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 RPS6P4-201ENST00000494693 758 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 OR2A20P-203ENST00000498397 1268 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AL121766.1-201ENST00000547436 487 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC090502.2-201ENST00000549267 280 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AF131215.7-201ENST00000602443 707 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC005191.1-201ENST00000603950 358 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 HSPE1P14-201ENST00000605812 302 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 SNORD91B-202ENST00000608459 222 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC011939.3-201ENST00000613686 466 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 MIR6864-201ENST00000617935 70 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AL031667.3-201ENST00000620124 655 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 Z69908.1-201ENST00000622603 247 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC067931.1-201ENST00000624190 671 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC098679.5-201ENST00000624394 571 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP3Q96JB5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC021146.4-201ENST00000309229 279 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 SNORD96B-201ENST00000386148 79 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 RNA5SP397-201ENST00000391323 118 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 RPL23AP29-201ENST00000397284 453 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 SDHCP2-201ENST00000398565 501 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 FABP12P1-201ENST00000401911 322 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AL450338.1-201ENST00000407987 512 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 RNU2-28P-201ENST00000410457 189 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 RPS12P5-201ENST00000423449 371 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AL035407.1-201ENST00000429211 571 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 RPL21P91-201ENST00000429231 479 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 RPL23AP93-201ENST00000440847 484 ntBASIC5.11□□□□□ -1.59
CDK5RAP3Q96JB5 RPL36AP15-201ENST00000444514 266 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms