Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM5Q96HC4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4□□□□□ -1.77
PDLIM5Q96HC4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM5Q96HC4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4□□□□□ -1.77
PDLIM5Q96HC4 FAM91A3P-201ENST00000456826 2544 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 SNORA31-201ENST00000362607 130 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 RNU5B-1-201ENST00000363286 116 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 OR1L1-202ENST00000373686 1083 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC234772.1-201ENST00000377927 937 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 RN7SKP33-201ENST00000410942 340 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 VN1R51P-201ENST00000411675 945 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC106883.1-201ENST00000418805 562 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 RPL18P10-201ENST00000425606 538 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 Z80107.1-201ENST00000436830 412 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC000041.1-201ENST00000439655 175 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 NDUFA5P7-201ENST00000452914 242 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 FABP3P2-201ENST00000453169 399 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 RPL38P1-201ENST00000460914 211 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 SYPL1P1-201ENST00000473622 768 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC048346.1-201ENST00000510247 144 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC107954.1-201ENST00000565906 727 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 MIR4284-201ENST00000578924 81 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC007687.1-201ENST00000602704 304 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC113368.1-201ENST00000603736 382 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 DPRXP5-201ENST00000604662 539 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC128687.2-201ENST00000609657 566 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC084824.4-201ENST00000620106 731 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC010608.2-201ENST00000624830 470 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 ZNF37BP-203ENST00000452306 1352 ntBASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM5Q96HC4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 RNU6-115P-201ENST00000364310 107 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 RNU6-619P-201ENST00000365146 108 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 MTCO2P8-201ENST00000412213 658 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 FAR2P2-201ENST00000413041 594 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 IFNNP1-201ENST00000429219 553 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 MTCYBP15-201ENST00000433123 1127 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 RRM2P4-201ENST00000441721 562 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 AL133477.1-201ENST00000457472 514 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 NF1P3-201ENST00000457709 450 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 snoU109.3-201ENST00000459477 145 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 AC105137.1-201ENST00000484355 562 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 AC096571.1-202ENST00000506634 735 ntBASIC3.98□□□□□ -1.77
PDLIM5Q96HC4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms