Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 VN1R7P-201ENST00000619242 903 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 MTND2P41-201ENST00000637599 773 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC006927.2-201ENST00000639256 389 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC139713.2-210ENST00000641741 992 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VMP1Q96GC9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VMP1Q96GC9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
VMP1Q96GC9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VMP1Q96GC9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC004925.1-201ENST00000624256 2706 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 OR5P1P-201ENST00000299512 925 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 RNU6-251P-201ENST00000363235 104 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 RNU1-63P-201ENST00000383902 164 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 AL161909.1-201ENST00000397390 712 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 ARF4P2-201ENST00000430209 526 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 SNORA71B-202ENST00000439232 272 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC127537.2-201ENST00000439258 465 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 PHBP16-201ENST00000446318 950 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 HMGB3P22-202ENST00000451823 572 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 RN7SL98P-201ENST00000462271 300 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC011276.1-201ENST00000469688 323 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 GAPDHP39-201ENST00000481866 979 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 MTCO2P32-201ENST00000514865 403 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 MIR2114-201ENST00000516645 80 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 SNORA31.20-201ENST00000517111 133 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC068831.4-201ENST00000556118 109 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC011468.4-201ENST00000603942 409 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC010201.1-201ENST00000605051 540 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 MIR378J-201ENST00000611988 109 ntBASIC4.13□□□□□ -1.75
VMP1Q96GC9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VMP1Q96GC9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
VMP1Q96GC9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
VMP1Q96GC9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
VMP1Q96GC9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VMP1Q96GC9 RNU6-1249P-201ENST00000363237 111 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 RNU6-839P-201ENST00000363347 108 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 RNA5SP509-201ENST00000364577 119 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VMP1Q96GC9 MIR3065-201ENST00000390137 79 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VMP1Q96GC9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 SNRPFP1-201ENST00000414761 252 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 RAD23BP2-201ENST00000416003 1207 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 AL592293.2-201ENST00000422292 996 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 RPL31P54-201ENST00000429803 370 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 DHFRP3-201ENST00000455595 559 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 HMGN2P16-201ENST00000456802 261 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 MTCO3P35-201ENST00000485582 781 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 AL024509.2-201ENST00000493462 493 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 RN7SL812P-201ENST00000493791 279 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 AC084024.2-201ENST00000503480 791 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 HPRT1P1-201ENST00000509498 657 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.12□□□□□ -1.75
VMP1Q96GC9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.12□□□□□ -1.75
VMP1Q96GC9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms