Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC107982.3-201ENST00000584957 985 ntBASIC3.88□□□□□ -1.79
PTP4A1Q93096 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.88□□□□□ -1.79
PTP4A1Q93096 AC092954.1-201ENST00000609121 445 ntBASIC3.88□□□□□ -1.79
PTP4A1Q93096 AC006329.2-201ENST00000611491 394 ntBASIC3.88□□□□□ -1.79
PTP4A1Q93096 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PTP4A1Q93096 AC073342.3-201ENST00000624211 193 ntBASIC3.88□□□□□ -1.79
PTP4A1Q93096 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.88□□□□□ -1.79
PTP4A1Q93096 LINC02471-203ENST00000641941 4752 ntBASIC3.88□□□□□ -1.79
PTP4A1Q93096 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PTP4A1Q93096 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTP4A1Q93096 OR56B2P-202ENST00000641377 2453 ntBASIC3.88□□□□□ -1.79
PTP4A1Q93096 AC000367.1-201ENST00000452711 1766 ntBASIC3.88□□□□□ -1.79
PTP4A1Q93096 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
PTP4A1Q93096 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.88□□□□□ -1.79
PTP4A1Q93096 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC008033.1-201ENST00000216407 1162 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 RNU6-50P-201ENST00000362356 103 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 MIR192-201ENST00000384915 110 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 RPS4XP9-201ENST00000405151 780 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC096533.1-201ENST00000411645 353 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AL161631.1-201ENST00000417933 486 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC092634.6-201ENST00000418558 192 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 CNOT7P1-201ENST00000429006 852 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 MTCO1P3-201ENST00000429327 192 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 DHFRP3-201ENST00000455595 559 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 PLGLA-201ENST00000465668 449 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 PABPC1P3-201ENST00000469174 459 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 RN7SL585P-201ENST00000470538 280 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AL024509.2-201ENST00000493462 493 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 RN7SL812P-201ENST00000493791 279 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC108078.3-201ENST00000502633 489 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 SNORA31.20-201ENST00000517111 133 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 OR8I1P-201ENST00000529291 931 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC084783.1-201ENST00000565846 910 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 AP001160.4-201ENST00000596971 382 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC103710.3-201ENST00000608157 948 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC093673.2-201ENST00000609674 331 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 BX323046.1-201ENST00000610145 535 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AL021997.2-201ENST00000615674 271 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 AC008785.1-201ENST00000624475 456 ntBASIC3.87□□□□□ -1.79
PTP4A1Q93096 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PTP4A1Q93096 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTP4A1Q93096 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTP4A1Q93096 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTP4A1Q93096 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTP4A1Q93096 AL672296.1-201ENST00000427780 2158 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTP4A1Q93096 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTP4A1Q93096 RNU6-989P-201ENST00000362756 107 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 SNORA51.6-201ENST00000384151 125 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 Y_RNA.578-201ENST00000390903 88 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 Z98941.1-201ENST00000407764 100 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 RNU2-28P-201ENST00000410457 189 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 RPL37P18-201ENST00000411602 243 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 RPL7AP25-201ENST00000423357 805 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 KCTD10P1-201ENST00000434203 625 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTP4A1Q93096 PNPLA4P1-201ENST00000458328 305 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 RPL23AP62-201ENST00000463396 453 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 RPL6P9-201ENST00000466502 859 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 CAB39P1-201ENST00000502277 460 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 USP9YP5-201ENST00000511770 630 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 SNORA48.10-201ENST00000516965 160 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms