Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC027281.1-201ENST00000574178 758 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 MTCO2P2-201ENST00000591258 225 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC084373.1-201ENST00000603311 235 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 Z99289.3-201ENST00000605586 594 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC092079.1-201ENST00000558620 1985 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 RNU6-609P-201ENST00000365459 107 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 AL078595.1-201ENST00000404458 226 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC092648.1-201ENST00000425870 423 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 OR5AW1P-201ENST00000426334 1006 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 MRPS33P4-201ENST00000434892 317 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 BUD31P2-201ENST00000449374 300 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC073522.1-201ENST00000483312 377 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC020893.1-201ENST00000502452 580 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC139783.2-201ENST00000504847 1145 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 NAMPTP2-201ENST00000505629 1115 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 RN7SKP289-201ENST00000517244 295 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC023161.2-201ENST00000551218 780 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 AL450270.1-201ENST00000606160 391 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.38□□□□□ -1.71
SNED1Q8TER0 U6.48-201ENST00000618523 106 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 MIR6852-201ENST00000621699 66 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 AC139792.2-201ENST00000624218 587 ntBASIC4.38□□□□□ -1.71
SNED1Q8TER0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AL445437.1-201ENST00000623157 3087 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 SCN1A-220ENST00000641603 12506 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC083843.3-201ENST00000623679 2186 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC007685.1-201ENST00000329806 452 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 UBE2V1P1-201ENST00000430836 445 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 MTCO1P45-201ENST00000431457 267 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 RSL24D1P3-201ENST00000449255 495 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 CALM1P2-201ENST00000452941 448 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 C1DP3-201ENST00000455013 423 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC104164.3-201ENST00000467363 1258 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC010468.3-201ENST00000508225 458 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 MRPS36P5-201ENST00000551909 298 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 MIR7851-201ENST00000610611 160 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC074276.2-201ENST00000619891 348 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC079298.2-201ENST00000623885 459 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.37□□□□□ -1.71
SNED1Q8TER0 AC119674.1-220ENST00000641502 1048 ntBASIC4.37□□□□□ -1.71
SNED1Q8TER0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNED1Q8TER0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNED1Q8TER0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNED1Q8TER0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms