Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UBA3Q8TBC4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
UBA3Q8TBC4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBA3Q8TBC4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBA3Q8TBC4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.6□□□□□ -1.83
UBA3Q8TBC4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 MIR30E-201ENST00000362104 92 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 MIR183-201ENST00000384958 110 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 Z98941.1-201ENST00000407764 100 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AC007390.1-201ENST00000415722 356 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 BTF3P9-201ENST00000418784 283 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AC008065.1-201ENST00000428525 348 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 ARL5AP3-201ENST00000439327 386 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 MRPS31P2-201ENST00000451581 518 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 RPL21P10-201ENST00000463521 490 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 HMGN1P8-201ENST00000463578 288 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 RPS4XP10-201ENST00000465034 731 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 MTCO3P42-201ENST00000509488 518 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 MTCO3P39-201ENST00000514812 518 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 DUXAP2-201ENST00000519198 589 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AP000619.3-201ENST00000535634 1127 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 MIR5047-201ENST00000579212 100 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 MIR92B-201ENST00000607575 96 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AC112503.1-201ENST00000608436 391 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AL392048.1-201ENST00000613946 534 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 MIR8058-201ENST00000615737 89 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AL355365.1-201ENST00000616480 294 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 AC006065.5-201ENST00000623427 349 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 U6.105-201ENST00000637379 88 ntBASIC3.59□□□□□ -1.83
UBA3Q8TBC4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UBA3Q8TBC4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
UBA3Q8TBC4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.59□□□□□ -1.84
UBA3Q8TBC4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.59□□□□□ -1.84
UBA3Q8TBC4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
UBA3Q8TBC4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
UBA3Q8TBC4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 GSTA12P-201ENST00000402398 508 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC004022.2-201ENST00000413824 193 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 MTND4P11-201ENST00000417020 1058 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AP000907.1-201ENST00000428428 510 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC097713.2-201ENST00000430199 356 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 RPS24P8-201ENST00000431490 402 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC009263.1-201ENST00000441193 1239 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 RPL6P5-201ENST00000445678 828 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 PRDX3P3-201ENST00000447765 522 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AL358232.1-201ENST00000448030 501 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC008155.2-201ENST00000464337 397 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC093663.1-201ENST00000497190 394 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC020893.1-201ENST00000502452 580 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 PCBP2P3-201ENST00000509726 843 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 FCF1P8-201ENST00000510322 597 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC021146.1-201ENST00000511202 716 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC117525.1-201ENST00000515228 503 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 MIR2276-201ENST00000516886 89 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 TGIF1P1-201ENST00000558095 802 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC053481.3-201ENST00000577881 843 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC006557.5-201ENST00000603126 811 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC008739.3-201ENST00000603262 127 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AL162713.1-201ENST00000604480 262 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 AC015967.1-201ENST00000619893 476 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 MIR6075-201ENST00000620782 95 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBA3Q8TBC4 PRO1804-201ENST00000623780 2050 ntBASIC3.58□□□□□ -1.84
UBA3Q8TBC4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms