Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 CYCSP39-201ENST00000565821 309 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 OR2AS2P-201ENST00000606902 342 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 RPL21P109-201ENST00000422213 475 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC092809.1-201ENST00000441469 474 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AL135938.1-201ENST00000443141 297 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 HMGB1P5-202ENST00000451497 985 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 RNU1-41P-201ENST00000516161 162 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 RNU1-48P-201ENST00000516400 162 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 OR4A12P-201ENST00000530847 918 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 RNU4-82P-201ENST00000362443 140 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AL139413.1-201ENST00000421309 217 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 NPM1P13-201ENST00000452663 865 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 YWHAEP4-201ENST00000505390 198 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC127502.3-201ENST00000636170 1206 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 RPS4XP5-202ENST00000449995 1334 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 OR5H2-201ENST00000355273 945 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 EEF1A1P41-201ENST00000414667 207 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 SDCBPP2-201ENST00000424643 885 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 MIR7702-201ENST00000621931 59 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 OR5AC4P-202ENST00000642086 985 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 RNU1-18P-201ENST00000363062 164 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AL357075.1-201ENST00000404107 726 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 HSPE1P8-201ENST00000406997 288 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC002075.2-201ENST00000425207 252 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 HIGD1AP4-201ENST00000430194 280 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 EIF4A1P11-201ENST00000451239 222 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC099560.2-201ENST00000457554 255 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 RN7SL93P-201ENST00000463035 293 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 IGHV3-32-201ENST00000519182 355 ntBASIC1.01□□□□□ -2.25
SYNE1Q8NF91 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE1Q8NF91 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC1□□□□□ -2.25
SYNE1Q8NF91 Y_RNA.40-201ENST00000362645 93 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 RNU1-87P-201ENST00000363727 170 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC1□□□□□ -2.25
SYNE1Q8NF91 HIGD1AP12-201ENST00000427832 281 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AL109933.2-201ENST00000452651 260 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1□□□□□ -2.25
SYNE1Q8NF91 RNU4ATAC6P-201ENST00000516592 126 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 TBCA-206ENST00000518338 551 ntTSL 2 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AP001207.2-201ENST00000519490 539 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 PSMA2P1-201ENST00000526365 646 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
SYNE1Q8NF91 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 RPL23AP71-201ENST00000470966 469 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC106872.2-201ENST00000494303 480 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 HNRNPKP5-201ENST00000515300 253 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AF186190.1-201ENST00000517470 480 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 TGIF1P1-201ENST00000558095 802 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC1□□□□□ -2.25
SYNE1Q8NF91 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC1□□□□□ -2.25
SYNE1Q8NF91 NRBF2P5-201ENST00000603087 788 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 AL133247.2-201ENST00000603236 482 ntBASIC1□□□□□ -2.25
SYNE1Q8NF91 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1□□□□□ -2.25
SYNE1Q8NF91 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
SYNE1Q8NF91 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms