Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC091965.2-201ENST00000512324 613 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 RNU6-347P-201ENST00000516658 105 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC011260.1-201ENST00000578420 472 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 MIR7853-201ENST00000584820 132 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 RSL24D1P11-201ENST00000591045 491 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC004987.4-201ENST00000603383 338 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC010632.3-201ENST00000611377 369 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC092656.1-203ENST00000624134 423 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AL392088.2-201ENST00000637607 285 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 Y_RNA.559-201ENST00000384686 107 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 VDAC2P1-201ENST00000399358 958 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 RPL7P8-201ENST00000411964 730 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AL353706.1-201ENST00000436728 494 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 OR52E3P-201ENST00000452083 936 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AC079168.2-201ENST00000453977 416 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AC245028.2-201ENST00000458673 253 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 SCARNA10-201ENST00000459255 330 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 RN7SL98P-201ENST00000462271 300 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 RPL7P49-201ENST00000471402 708 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AL024509.2-201ENST00000493462 493 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 HMGB1P28-201ENST00000507778 552 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 LTV1P1-201ENST00000510683 1237 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AC092851.1-201ENST00000535964 478 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 OR7K1P-201ENST00000546439 926 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 MIR4472-2-201ENST00000582069 67 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 U73023.1-201ENST00000603134 700 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AL139286.2-201ENST00000606838 396 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AC103591.3-201ENST00000608684 209 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 AL022401.1-201ENST00000619498 108 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 OR5BR1P-201ENST00000524992 1330 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 THAP12P5-201ENST00000405864 2275 ntBASIC5.62□□□□□ -1.51
SMC1BQ8NDV3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 CYCSP45-201ENST00000402289 315 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 EIF4A1P3-201ENST00000411521 244 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 TPMTP3-201ENST00000411928 735 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 USP9YP4-201ENST00000424401 1745 ntBASIC5.61□□□□□ -1.51
SMC1BQ8NDV3 SOCS5P3-201ENST00000425115 1576 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms