Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ARHGEF39Q8N4T4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.26□□□□□ -1.57
ARHGEF39Q8N4T4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.26□□□□□ -1.57
ARHGEF39Q8N4T4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ARHGEF39Q8N4T4 AC092070.2-203ENST00000598377 3644 ntBASIC5.26□□□□□ -1.57
ARHGEF39Q8N4T4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ARHGEF39Q8N4T4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ARHGEF39Q8N4T4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ARHGEF39Q8N4T4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ARHGEF39Q8N4T4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ARHGEF39Q8N4T4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 RNU4-73P-201ENST00000363164 141 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 RNU6-1097P-201ENST00000363586 107 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 Y_RNA.234-201ENST00000364409 97 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 RN7SKP6-201ENST00000364795 319 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 SNORD82-201ENST00000365530 70 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 SNORA69-201ENST00000383895 132 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AL391361.1-201ENST00000405580 489 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 RNU2-9P-201ENST00000410194 145 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 RPL35AP24-201ENST00000413846 330 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AL136231.1-201ENST00000429407 730 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 UBE2V1P13-201ENST00000436983 439 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC108734.1-201ENST00000439549 399 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 RPS26P39-201ENST00000469206 341 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 RPL39P36-201ENST00000490784 156 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC011411.1-201ENST00000509592 876 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 Y_RNA.675-201ENST00000516389 149 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 IGKV2-18-201ENST00000522607 343 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 OR4R1P-201ENST00000529879 463 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 PDCD5P1-201ENST00000543528 309 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC063949.1-201ENST00000552900 865 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 HMGB1P6-201ENST00000569046 646 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 MIR3146-201ENST00000580367 79 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC008782.1-201ENST00000603386 430 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 RMST_3.1-201ENST00000611651 109 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC024940.5-201ENST00000622889 474 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC000095.2-202ENST00000637415 154 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 AC112487.2-201ENST00000637950 304 ntBASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ARHGEF39Q8N4T4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 AL122126.1-201ENST00000546905 1318 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 AC020633.1-201ENST00000468439 2247 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 AC011978.2-201ENST00000569835 2054 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 RNA5SP258-201ENST00000362750 119 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 RNU1-130P-201ENST00000363930 160 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 RNU6-108P-201ENST00000365558 107 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 SNORA16A-201ENST00000384342 137 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 Y_RNA.509-201ENST00000384506 99 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 Y_RNA.529-201ENST00000384586 119 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 MIR551A-201ENST00000385042 96 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 snosnR66.1-201ENST00000391095 99 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 RNU6-373P-201ENST00000411247 98 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 RPSAP35-201ENST00000413753 818 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 RGS17P1-201ENST00000423358 553 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 AC008850.1-201ENST00000427546 362 ntBASIC5.24□□□□□ -1.57
ARHGEF39Q8N4T4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms