Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNU6-550P-201ENST00000391057 101 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC116036.1-201ENST00000412199 367 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 FABP7P2-201ENST00000429946 379 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 FTLP17-201ENST00000432567 525 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 RPL21P112-201ENST00000434403 463 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 MYL6P3-201ENST00000436904 432 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AL035666.1-201ENST00000446195 348 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 RN7SL379P-201ENST00000479912 293 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 RPL21P93-201ENST00000480465 489 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC106872.2-201ENST00000494303 480 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 MRPL57P6-201ENST00000506570 309 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC108078.2-201ENST00000510750 236 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 MTCO3P44-201ENST00000510977 541 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 SCARNA11.1-201ENST00000516918 132 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 DEFB108D-201ENST00000527787 222 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 MIR4800-201ENST00000537353 80 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 MIR5682-201ENST00000584864 76 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AL670379.6-201ENST00000603753 252 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC008162.1-201ENST00000604718 254 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AL670379.1-201ENST00000604752 252 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AL670379.5-201ENST00000605253 252 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AL670379.8-201ENST00000605353 252 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AL670379.7-201ENST00000605823 252 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC012409.4-201ENST00000612923 249 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC090510.2-201ENST00000617465 629 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 AC062022.1-201ENST00000451026 1684 ntBASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
DEPDC4Q8N2C3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 Y_RNA.148-201ENST00000363557 117 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 Y_RNA.158-201ENST00000363651 101 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-601P-201ENST00000384540 107 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 MIR187-201ENST00000385062 109 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-1106P-201ENST00000390845 107 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 CYCSP17-201ENST00000407870 315 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 SNORA11.3-201ENST00000408471 128 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 GJA6P-201ENST00000415117 1042 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 RPL24P2-201ENST00000421023 475 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AL590609.2-201ENST00000421430 368 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC245884.2-201ENST00000426257 404 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 MTCYBP9-201ENST00000431021 303 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 RPL23AP89-201ENST00000439324 255 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 MTCO3P10-201ENST00000455912 772 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 PPIAP21-201ENST00000464473 501 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 RN7SL432P-201ENST00000484057 298 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC002456.2-201ENST00000509356 380 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AP003122.3-201ENST00000526316 255 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 RANP3-201ENST00000530970 276 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC066616.2-201ENST00000559334 1481 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC106785.4-201ENST00000569492 412 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 RN7SL270P-201ENST00000579643 281 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 CTSLP2-201ENST00000580501 394 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 MIR4503-201ENST00000582187 83 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 VN1R107P-201ENST00000601784 209 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC083806.3-201ENST00000614016 455 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 SNORA11.6-201ENST00000619030 128 ntBASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
DEPDC4Q8N2C3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms