Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AP001858.2-201ENST00000536213 601 ntBASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 AC026826.3-201ENST00000561747 158 ntBASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 HMGB2P1-201ENST00000591146 634 ntBASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 AC009779.6-201ENST00000603972 165 ntBASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 AC090220.1-201ENST00000593078 1699 ntBASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 SAMMSON-213ENST00000641336 1521 ntBASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCUBE3Q8IX30 TPTE2P4-201ENST00000258589 1605 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 Y_RNA.234-201ENST00000364409 97 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 SNORA41-201ENST00000384675 132 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 Y_RNA.576-201ENST00000384781 102 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 RNA5SP115-201ENST00000411160 107 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 MRPS18CP6-201ENST00000423587 223 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AL645936.1-201ENST00000441979 518 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC234771.2-201ENST00000445718 597 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC116533.1-201ENST00000459748 321 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC021382.1-201ENST00000483523 359 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC108860.1-201ENST00000484521 383 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC022447.4-201ENST00000504053 364 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC104806.1-201ENST00000508720 308 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 TPRX1P1-201ENST00000557620 319 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC023968.1-201ENST00000560719 475 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 MIR3941-201ENST00000582572 103 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC063977.7-201ENST00000594454 337 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC011494.1-201ENST00000596454 237 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC012368.3-201ENST00000604190 219 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 AC078880.4-201ENST00000617627 1749 ntBASIC6.79□□□□□ -1.32
SCUBE3Q8IX30 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AC007406.5-201ENST00000570140 3170 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 THAP12P4-201ENST00000528321 2266 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 Y_RNA.20-201ENST00000362479 113 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 Y_RNA.64-201ENST00000362845 102 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 RNU6-1159P-201ENST00000362933 107 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 Y_RNA.464-201ENST00000384282 110 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 MIR19A-201ENST00000384878 82 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 DSTNP4-201ENST00000399472 474 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 GSTM3P2-201ENST00000412746 530 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AL590632.1-201ENST00000424289 371 ntBASIC6.78□□□□□ -1.32
SCUBE3Q8IX30 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms