Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHFQ7M4L6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC012435.1-202ENST00000568772 240 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 VN1R92P-201ENST00000598511 928 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 NXPH1-205ENST00000602349 1953 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC090181.2-201ENST00000602975 672 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC010201.1-201ENST00000605051 540 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AP002360.3-201ENST00000607673 710 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC024560.3-201ENST00000608482 349 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AL138721.1-201ENST00000616756 179 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 Z69908.1-201ENST00000622603 247 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC092184.1-201ENST00000625042 715 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHFQ7M4L6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC016588.2-201ENST00000632484 3021 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHFQ7M4L6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHFQ7M4L6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHFQ7M4L6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 RNA5SP191-201ENST00000362585 102 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 RNU6-984P-201ENST00000363236 109 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 RNA5SP123-201ENST00000363244 119 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 RNU6-146P-201ENST00000384602 108 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHFQ7M4L6 VN1R8P-201ENST00000407739 893 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 RNU4-34P-201ENST00000410431 124 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 RNA5SP39-201ENST00000411245 120 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC004022.2-201ENST00000413824 193 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 MTCYBP38-201ENST00000417160 1123 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC140479.3-201ENST00000418944 1126 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AL590609.2-201ENST00000421430 368 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 MTND1P20-201ENST00000430341 950 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 MTCO1P48-201ENST00000448024 1096 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AL451050.1-201ENST00000450126 415 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 SNX5P1-201ENST00000505757 1041 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 PPBPP1-201ENST00000510807 373 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 RNU6-583P-201ENST00000516012 92 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC021006.3-201ENST00000530771 192 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC107918.3-201ENST00000533272 382 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC105129.1-201ENST00000560250 297 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC020914.6-201ENST00000594327 272 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AP001981.2-201ENST00000603241 418 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AL160290.3-201ENST00000604869 165 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC020634.1-201ENST00000608701 549 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 AC015908.5-201ENST00000623289 343 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 C4BPAP1-201ENST00000415474 1893 ntBASIC4.07□□□□□ -1.76
SHFQ7M4L6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.07□□□□□ -1.76
SHFQ7M4L6 IQCB2P-201ENST00000401788 1633 ntBASIC4.06□□□□□ -1.76
SHFQ7M4L6 AC125257.1-201ENST00000560400 2930 ntBASIC4.06□□□□□ -1.76
SHFQ7M4L6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHFQ7M4L6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHFQ7M4L6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SHFQ7M4L6 Y_RNA.18-201ENST00000362461 102 ntBASIC4.06□□□□□ -1.76
SHFQ7M4L6 Y_RNA.77-201ENST00000362962 107 ntBASIC4.06□□□□□ -1.76
SHFQ7M4L6 RNU1-85P-201ENST00000364127 164 ntBASIC4.06□□□□□ -1.76
SHFQ7M4L6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHFQ7M4L6 SNORA11.3-201ENST00000408471 128 ntBASIC4.06□□□□□ -1.76
SHFQ7M4L6 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.06□□□□□ -1.76
SHFQ7M4L6 RN7SKP216-201ENST00000411050 312 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms