Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 RNA5SP28-201ENST00000363841 119 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 Y_RNA.359-201ENST00000365498 102 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 RNU6-452P-201ENST00000384406 107 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AL583835.1-201ENST00000399570 407 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 RPS16P5-201ENST00000406501 404 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AP000357.1-201ENST00000409926 1165 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 MTATP6P13-201ENST00000438531 667 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 TRIM60P18-201ENST00000441518 828 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AL357520.1-201ENST00000441557 453 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 HMGB1P16-201ENST00000447155 540 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 ABCF2P2-201ENST00000450549 296 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 KATNBL1P6-201ENST00000453433 915 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 RNU6-956P-201ENST00000458868 103 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 RPL7AP28-201ENST00000464513 571 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 OR5G4P-201ENST00000525251 760 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC025260.1-201ENST00000548858 430 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC068831.4-201ENST00000556118 109 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 RPL12P25-202ENST00000598100 674 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AL354984.3-201ENST00000604803 325 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AL391497.1-201ENST00000608671 547 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AP005019.3-201ENST00000620418 560 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC019278.1-201ENST00000623516 479 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC116618.1-201ENST00000634617 774 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC068137.3-201ENST00000639191 341 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC073869.6-201ENST00000640656 341 ntBASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AL121657.1-201ENST00000327215 531 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 Y_RNA.6-201ENST00000362350 114 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 RNU6-621P-201ENST00000364752 109 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 MIR129-1-201ENST00000384972 72 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 SNORD65.1-201ENST00000390889 71 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 RNA5SP332-201ENST00000391063 115 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 CYB5AP4-201ENST00000396692 399 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 TPMTP3-201ENST00000411928 735 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 FCF1P9-201ENST00000412546 282 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 MTND1P23-201ENST00000416931 372 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AL358176.3-201ENST00000420757 454 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 Z99497.1-201ENST00000421282 135 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC073335.1-201ENST00000427776 363 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms