Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC007685.1-201ENST00000329806 452 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 SNORA63.3-201ENST00000362682 132 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 RNU6-207P-201ENST00000384137 107 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 RNU6-549P-201ENST00000384433 107 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 HMGN2P8-201ENST00000391458 268 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 TMSB4XP8-201ENST00000402089 135 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 MTCO2P31-201ENST00000402702 684 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 RAB28P1-201ENST00000411517 641 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 TMSB4XP6-201ENST00000415187 135 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 LIPT1P1-201ENST00000415870 1186 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 TMSB4XP1-201ENST00000424567 135 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 RSL24D1P6-201ENST00000426934 401 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC114973.1-201ENST00000429057 632 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 UBE2V1P6-201ENST00000430840 422 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AL356276.2-201ENST00000435919 558 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 SEPT14P24-201ENST00000447236 180 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 RPL7P59-201ENST00000447700 943 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 FABP3P2-201ENST00000453169 399 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 RPL21P18-201ENST00000469899 480 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 RN7SL860P-201ENST00000473738 223 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 MTCO1P35-201ENST00000515270 228 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 IGHV3-29-201ENST00000604817 344 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 VN1R74P-201ENST00000613259 503 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 AC018926.1-201ENST00000616335 435 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 MIR492-201ENST00000638676 116 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 BX649567.1-201ENST00000642071 1134 ntBASIC3.59□□□□□ -1.83
NIPAL3Q6P499 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.59□□□□□ -1.83
NIPAL3Q6P499 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NIPAL3Q6P499 AL157700.1-201ENST00000561973 1432 ntBASIC3.59□□□□□ -1.84
NIPAL3Q6P499 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NIPAL3Q6P499 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NIPAL3Q6P499 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NIPAL3Q6P499 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 RNU1-18P-201ENST00000363062 164 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 RNU6-374P-201ENST00000364146 108 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 RNA5SP189-201ENST00000364920 115 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 SNORA40.4-201ENST00000390971 128 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 GSTA8P-201ENST00000404253 637 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 MTCO3P31-201ENST00000405526 789 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AL355615.1-201ENST00000406187 641 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 RNU4-6P-201ENST00000410804 122 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 NPM1P49-201ENST00000448027 714 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 NF1P3-201ENST00000457709 450 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AC010307.1-201ENST00000467206 836 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AC011352.3-201ENST00000505162 593 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AC005921.1-201ENST00000510589 286 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 MIR2114-201ENST00000516645 80 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AC002487.1-201ENST00000604565 994 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 MIR6868-201ENST00000611215 58 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms