Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 PPIAP17-201ENST00000438507 471 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC011753.3-201ENST00000443436 406 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AL137845.2-201ENST00000444292 988 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AL360221.1-201ENST00000445989 335 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AL034418.1-201ENST00000448675 860 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 RPL7P31-201ENST00000450192 724 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 RPL12P26-201ENST00000452430 487 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 NDUFA5P7-201ENST00000452914 242 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 RN7SL319P-201ENST00000480656 221 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 MTND5P13-201ENST00000513046 1079 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 RNU6-488P-201ENST00000515918 99 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 RNA5SP43-201ENST00000516559 110 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 RNU6-885P-201ENST00000516607 104 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 SOD1P3-201ENST00000518682 454 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 GTF2IP8-201ENST00000560687 584 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AGGF1P8-201ENST00000562979 1000 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 ACTR3BP3-201ENST00000565577 979 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 WISP1-OT1-201ENST00000602893 642 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 MIR6864-201ENST00000617935 70 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 MIR6758-201ENST00000620653 63 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC124312.6-202ENST00000623624 418 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 AC007494.3-201ENST00000624660 743 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 BMS1P21-201ENST00000634565 365 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 MIR6715B-201ENST00000637172 77 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.43□□□□□ -1.7
HMBOX1Q6NT76 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 MTND4P26-201ENST00000415971 1359 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 Y_RNA.194-201ENST00000363985 102 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 TAF9BP1-201ENST00000396646 746 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AL139098.1-201ENST00000407291 389 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 PIGPP2-201ENST00000411569 458 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 COX6B1P1-201ENST00000415962 213 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 NUP35P2-201ENST00000416748 943 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 RPS12P5-201ENST00000423449 371 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AL645608.4-201ENST00000423619 154 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC234779.1-201ENST00000425910 285 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC068287.1-201ENST00000430283 295 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC008072.1-201ENST00000434254 824 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 FGF7P3-201ENST00000454645 303 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 RPL21P71-201ENST00000465598 459 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 RPL7P16-201ENST00000479738 738 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 RPS6P4-201ENST00000494693 758 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 SLC25A15P5-201ENST00000508033 253 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 RFPL1S-203ENST00000539579 330 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 MIR4270-201ENST00000581799 70 ntBASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.42□□□□□ -1.7
HMBOX1Q6NT76 AC067852.4-201ENST00000590314 478 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms