Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 AL645937.1-202ENST00000421799 937 ntBASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 HMGB1P18-201ENST00000438801 619 ntBASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 DNAJC19P1-201ENST00000455312 319 ntBASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 RNU6-964P-201ENST00000516524 69 ntBASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 CYCSP39-201ENST00000565821 309 ntBASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 CYP2C60P-201ENST00000566088 139 ntBASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 MIR7111-201ENST00000619751 72 ntBASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNAPC4Q5SXM2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 AC116158.1-201ENST00000560231 2129 ntBASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 AL136116.1-201ENST00000403591 381 ntBASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 HMGB3P18-201ENST00000406327 590 ntBASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 BMS1P22-201ENST00000414726 313 ntBASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 AC128713.1-201ENST00000471495 306 ntBASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 SUMO2P4-201ENST00000504193 276 ntBASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 AC107934.2-201ENST00000518653 310 ntBASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 AC009948.4-201ENST00000604692 675 ntBASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNAPC4Q5SXM2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SNAPC4Q5SXM2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SNAPC4Q5SXM2 RPS24P12-201ENST00000402084 394 ntBASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 AC010095.1-201ENST00000443543 144 ntBASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 RPL37P4-201ENST00000448908 268 ntBASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 AC114781.4-201ENST00000513707 639 ntBASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 SNORA70.19-201ENST00000516717 90 ntBASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 AC079600.2-201ENST00000550076 130 ntBASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SNAPC4Q5SXM2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC019097.1-201ENST00000424783 735 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC073508.1-201ENST00000428866 656 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 MRPS33P4-201ENST00000434892 317 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 RPL23AP67-201ENST00000465341 474 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AP000859.1-201ENST00000525536 307 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 MIR4738-201ENST00000579134 87 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC099654.11-201ENST00000638857 294 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AL356489.2-201ENST00000566968 3528 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 RNA5SP247-201ENST00000411181 105 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC010307.1-201ENST00000467206 836 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 TRBV8-2-201ENST00000475637 270 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 RPL7P47-201ENST00000497299 556 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 RFPL4AP3-201ENST00000515267 345 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 uc_338.1-201ENST00000612113 180 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AL359715.5-201ENST00000623431 443 ntBASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNAPC4Q5SXM2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 AC096644.4-201ENST00000563417 2912 ntBASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 AL049780.3-201ENST00000624612 1583 ntBASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 NR1H5P-201ENST00000452683 1377 ntBASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 MYL8P-204ENST00000431574 518 ntBASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 TRBV12-1-201ENST00000479785 344 ntBASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 RPS4XP22-201ENST00000480755 780 ntBASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 RNU6-1334P-201ENST00000516032 105 ntBASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 AC124856.1-201ENST00000600819 896 ntBASIC5.06□□□□□ -1.6
SNAPC4Q5SXM2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms