Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RPL17P12-201ENST00000413391 526 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC007738.1-201ENST00000413892 348 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 OFD1P18Y-201ENST00000420889 959 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 COX6CP17-201ENST00000421389 185 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 GLRXP1-201ENST00000423261 334 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 COX6CP12-201ENST00000446748 202 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 SNRPGP9-201ENST00000456025 225 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RPL37P6-202ENST00000464216 403 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RN7SL319P-201ENST00000480656 221 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC022133.1-201ENST00000490961 571 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 GTF2IP22-201ENST00000554443 182 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC093591.2-201ENST00000565254 3843 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 BBIP1P1-201ENST00000602999 279 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC025588.3-201ENST00000604182 274 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC105429.2-201ENST00000610567 517 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 AC009878.1-201ENST00000621819 340 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 PABPC1P9-201ENST00000426076 1612 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 ZNF652P1-201ENST00000442420 1309 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 NUP58P1-201ENST00000502546 1738 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AL049697.2-201ENST00000403708 294 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 RPS4XP9-201ENST00000405151 780 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 RPL37P21-201ENST00000435890 276 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 RPL7P11-201ENST00000437586 658 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 RPL35AP21-201ENST00000437667 333 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 IGHV5-78-201ENST00000450948 295 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 SNRPFP4-201ENST00000456366 242 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 MRPS33P2-201ENST00000507850 322 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 HMGB3P16-201ENST00000508037 287 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 RAB9BP1-201ENST00000519581 626 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 OR6C7P-201ENST00000547875 934 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 RN7SL435P-201ENST00000584418 282 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC119751.7-201ENST00000600494 245 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 PRELID3BP8-201ENST00000604148 295 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AP003117.2-201ENST00000606010 545 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC097468.3-201ENST00000607956 456 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AP005432.2-201ENST00000608162 586 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC025594.3-201ENST00000613068 790 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC090116.1-201ENST00000615679 446 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AL731566.2-201ENST00000618971 317 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 AC112198.2-201ENST00000426589 6996 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms