Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AL365440.1-201ENST00000436135 2167 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 NMD3P1-201ENST00000439704 1488 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AC073508.1-201ENST00000428866 656 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 BX119904.1-201ENST00000432026 348 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 ELOCP18-201ENST00000434209 337 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AP001086.1-201ENST00000494882 321 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 MTATP6P22-201ENST00000507369 598 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 MTCO1P30-201ENST00000515244 580 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 RNA5SP154-201ENST00000516193 111 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AC233266.2-201ENST00000567067 528 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 CBX3P2-202ENST00000583365 535 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 U4.6-201ENST00000621618 127 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AC138649.5-201ENST00000637456 137 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AP000553.6-201ENST00000641242 118 ntBASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM1Q2M3G4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 USP8P1-201ENST00000494673 3183 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 RNU6-452P-201ENST00000384406 107 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 MIR142-201ENST00000384835 87 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 MIR153-1-201ENST00000384914 90 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 RNU2-65P-201ENST00000410162 185 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 RNU2-72P-201ENST00000411175 163 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC017083.1-201ENST00000428093 483 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC005300.1-201ENST00000428401 373 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 WBP1LP4-201ENST00000505043 344 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC010468.3-201ENST00000508225 458 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 RANP9-201ENST00000519957 271 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC007687.1-201ENST00000602704 304 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC018754.1-201ENST00000607486 925 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AC110792.4-201ENST00000609843 298 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AL512506.1-201ENST00000613918 449 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 IPO8P1-201ENST00000455509 3109 ntBASIC4.26□□□□□ -1.73
SHROOM1Q2M3G4 DCAF13P1-201ENST00000495256 1330 ntBASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 RNU4-35P-201ENST00000362588 141 ntBASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 RNA5SP267-201ENST00000364893 126 ntBASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 HMGB1P13-201ENST00000406019 642 ntBASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 FO393419.3-201ENST00000428741 282 ntBASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 AC087650.1-201ENST00000431445 468 ntBASIC4.25□□□□□ -1.73
SHROOM1Q2M3G4 AL353748.1-201ENST00000440753 474 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms