Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 AC110741.2-201ENST00000605278 268 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 uc_338.1-201ENST00000612113 180 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 RNU4-47P-201ENST00000410876 114 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 RNU1-143P-201ENST00000516296 146 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 EIF4BP1-201ENST00000554881 351 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 U1.23-201ENST00000610293 146 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 AC008121.2-201ENST00000614647 523 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 RNU1-68P-201ENST00000615382 146 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 U1.39-201ENST00000621562 146 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 AC024023.1-201ENST00000624530 922 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFX7Q2KHR2 AF117829.1-206ENST00000621883 3802 ntBASIC3.93□□□□□ -1.78
RFX7Q2KHR2 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 AL365361.1-201ENST00000566942 3481 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 U3.26-201ENST00000391236 204 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 RPS7P13-201ENST00000413955 498 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 RPS12P23-201ENST00000419579 400 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 BX890604.2-201ENST00000427883 474 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 AC236972.1-201ENST00000433225 199 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 ELOCP23-201ENST00000452014 332 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 RPL27AP5-201ENST00000469428 449 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 RN7SKP34-201ENST00000516142 244 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 AC104027.1-201ENST00000521887 300 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 AC006539.2-201ENST00000601729 572 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 AC010329.2-201ENST00000595195 2737 ntBASIC3.92□□□□□ -1.78
RFX7Q2KHR2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFX7Q2KHR2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 SNORA54-201ENST00000384281 123 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 GTF2IP23-201ENST00000423746 351 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 AL831737.1-201ENST00000441288 271 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 AC243772.1-201ENST00000451620 410 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 UBE2DNL-203ENST00000474922 222 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 AC068305.1-201ENST00000497406 726 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 AC108078.3-201ENST00000502633 489 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 AC100793.4-201ENST00000613683 429 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 AC105227.2-201ENST00000615075 605 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 BX005019.1-201ENST00000561881 1810 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
RFX7Q2KHR2 AC007342.7-201ENST00000624610 2337 ntBASIC3.91□□□□□ -1.78
RFX7Q2KHR2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
RFX7Q2KHR2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.9□□□□□ -1.78
RFX7Q2KHR2 SEC63P1-201ENST00000425785 1258 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 FAR1P1-201ENST00000427163 934 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 RPL23AP69-201ENST00000431134 458 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 RPL23AP22-201ENST00000437556 453 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 FTH1P25-201ENST00000447665 469 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 RN7SL863P-201ENST00000462370 296 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RFX7Q2KHR2 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.9□□□□□ -1.78
RFX7Q2KHR2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.9□□□□□ -1.78
RFX7Q2KHR2 AC023141.12-201ENST00000512399 199 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 IGKV2D-23-201ENST00000518179 286 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.9□□□□□ -1.78
RFX7Q2KHR2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.9□□□□□ -1.78
RFX7Q2KHR2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms