Protein–RNA interactions for Protein: Q16787

LAMA3, Laminin subunit alpha-3, humanhuman

Predictions only

Length 3,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3Q16787 AP001646.1-201ENST00000527936 915 ntBASIC3.17□□□□□ -1.9
LAMA3Q16787 uc_338.1-201ENST00000612113 180 ntBASIC3.17□□□□□ -1.9
LAMA3Q16787 AC004014.2-201ENST00000623718 5122 ntBASIC3.17□□□□□ -1.9
LAMA3Q16787 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.17□□□□□ -1.9
LAMA3Q16787 AC118273.1-201ENST00000525324 3006 ntBASIC3.17□□□□□ -1.9
LAMA3Q16787 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
LAMA3Q16787 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
LAMA3Q16787 RNA5SP289-201ENST00000362332 137 ntBASIC3.17□□□□□ -1.9
LAMA3Q16787 HMGN2P23-201ENST00000456759 269 ntBASIC3.17□□□□□ -1.9
LAMA3Q16787 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.17□□□□□ -1.9
LAMA3Q16787 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.17□□□□□ -1.9
LAMA3Q16787 AL442163.2-201ENST00000553912 710 ntBASIC3.17□□□□□ -1.9
LAMA3Q16787 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LAMA3Q16787 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LAMA3Q16787 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LAMA3Q16787 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LAMA3Q16787 AC087499.2-201ENST00000432861 149 ntBASIC3.16□□□□□ -1.9
LAMA3Q16787 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.16□□□□□ -1.9
LAMA3Q16787 USP9YP2-201ENST00000504503 1000 ntBASIC3.16□□□□□ -1.9
LAMA3Q16787 USP9YP1-201ENST00000513521 1002 ntBASIC3.16□□□□□ -1.9
LAMA3Q16787 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LAMA3Q16787 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LAMA3Q16787 AC005332.5-201ENST00000591222 2919 ntBASIC3.16□□□□□ -1.9
LAMA3Q16787 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LAMA3Q16787 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LAMA3Q16787 IFNNP1-201ENST00000429219 553 ntBASIC3.16□□□□□ -1.9
LAMA3Q16787 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LAMA3Q16787 AC012123.2-201ENST00000485809 248 ntBASIC3.16□□□□□ -1.9
LAMA3Q16787 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.16□□□□□ -1.9
LAMA3Q16787 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.16□□□□□ -1.9
LAMA3Q16787 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC3.16□□□□□ -1.9
LAMA3Q16787 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
LAMA3Q16787 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LAMA3Q16787 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LAMA3Q16787 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LAMA3Q16787 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LAMA3Q16787 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.16□□□□□ -1.9
LAMA3Q16787 AC245517.4-201ENST00000448601 281 ntBASIC3.16□□□□□ -1.9
LAMA3Q16787 METTL15P1-201ENST00000481421 1045 ntBASIC3.16□□□□□ -1.9
LAMA3Q16787 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.16□□□□□ -1.9
LAMA3Q16787 Y_RNA.164-201ENST00000363709 102 ntBASIC3.15□□□□□ -1.9
LAMA3Q16787 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
LAMA3Q16787 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LAMA3Q16787 AC123768.4-201ENST00000616244 701 ntBASIC3.15□□□□□ -1.9
LAMA3Q16787 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LAMA3Q16787 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC3.15□□□□□ -1.91
LAMA3Q16787 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LAMA3Q16787 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.15□□□□□ -1.91
LAMA3Q16787 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LAMA3Q16787 NPM1P37-201ENST00000403105 874 ntBASIC3.15□□□□□ -1.91
LAMA3Q16787 AL009174.1-201ENST00000426577 416 ntBASIC3.15□□□□□ -1.91
LAMA3Q16787 NPM1P24-201ENST00000428039 894 ntBASIC3.15□□□□□ -1.91
LAMA3Q16787 CST9LP2-201ENST00000437612 320 ntBASIC3.15□□□□□ -1.91
LAMA3Q16787 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.15□□□□□ -1.91
LAMA3Q16787 YWHAZP1-201ENST00000556286 722 ntBASIC3.15□□□□□ -1.91
LAMA3Q16787 AC106785.3-201ENST00000564064 847 ntBASIC3.15□□□□□ -1.91
LAMA3Q16787 AC103798.2-201ENST00000624292 632 ntBASIC3.15□□□□□ -1.91
LAMA3Q16787 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LAMA3Q16787 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
LAMA3Q16787 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
LAMA3Q16787 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LAMA3Q16787 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LAMA3Q16787 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.14□□□□□ -1.91
LAMA3Q16787 HMGB3P12-201ENST00000438745 556 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 UQCRHP3-201ENST00000451503 251 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.14□□□□□ -1.91
LAMA3Q16787 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.14□□□□□ -1.91
LAMA3Q16787 AC015712.3-201ENST00000559380 164 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LAMA3Q16787 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.14□□□□□ -1.91
LAMA3Q16787 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
LAMA3Q16787 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.14□□□□□ -1.91
LAMA3Q16787 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LAMA3Q16787 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LAMA3Q16787 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.14□□□□□ -1.91
LAMA3Q16787 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.14□□□□□ -1.91
LAMA3Q16787 RNA5SP21-201ENST00000410917 96 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 AL592045.1-201ENST00000429867 352 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.14□□□□□ -1.91
LAMA3Q16787 SKP1P1-201ENST00000438081 489 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 RPS3AP50-201ENST00000487064 803 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC3.14□□□□□ -1.91
LAMA3Q16787 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.14□□□□□ -1.91
LAMA3Q16787 AC011266.1-201ENST00000624119 3569 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 AL161781.1-201ENST00000354277 403 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 RPL21P109-201ENST00000422213 475 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 AC002075.2-201ENST00000425207 252 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.14□□□□□ -1.91
LAMA3Q16787 MTCO1P51-201ENST00000427672 1060 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 AC099560.2-201ENST00000457554 255 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 AC111000.2-201ENST00000507775 550 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.14□□□□□ -1.91
LAMA3Q16787 DNAJC19P3-201ENST00000594491 331 ntBASIC3.14□□□□□ -1.91
LAMA3Q16787 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LAMA3Q16787 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LAMA3Q16787 AC092079.1-201ENST00000558620 1985 ntBASIC3.13□□□□□ -1.91
LAMA3Q16787 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
LAMA3Q16787 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LAMA3Q16787 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LAMA3Q16787 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms