Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 AC083863.1-201ENST00000438811 231 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 RANP8-201ENST00000444720 713 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AL133547.1-201ENST00000448546 220 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 RPL21P11-201ENST00000461458 483 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC011037.1-201ENST00000483964 558 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 RPS27P23-201ENST00000487608 251 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 PRELID3BP7-201ENST00000503606 469 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC025554.1-201ENST00000505641 188 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC091860.1-201ENST00000505723 432 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC008885.2-201ENST00000509506 930 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 HNRNPKP5-201ENST00000515300 253 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 OR8I1P-201ENST00000529291 931 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.92□□□□□ -1.78
CNTN1Q12860 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.92□□□□□ -1.78
CNTN1Q12860 AC068446.3-201ENST00000555285 382 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 NIFKP8-201ENST00000560500 874 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC087499.8-201ENST00000578406 226 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.92□□□□□ -1.78
CNTN1Q12860 AL022067.1-201ENST00000602426 454 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.92□□□□□ -1.78
CNTN1Q12860 AL139395.1-201ENST00000603662 160 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 AC012603.1-201ENST00000606424 528 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.92□□□□□ -1.78
CNTN1Q12860 AL121652.1-201ENST00000608851 448 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.92□□□□□ -1.78
CNTN1Q12860 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 AC004825.2-201ENST00000616634 455 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 AC243756.2-201ENST00000618406 463 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 AC067852.7-201ENST00000623270 535 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC010608.3-201ENST00000625048 527 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC012442.3-202ENST00000636742 206 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC099654.9-201ENST00000637055 678 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 MIR6715B-201ENST00000637172 77 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.92□□□□□ -1.78
CNTN1Q12860 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CNTN1Q12860 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.91□□□□□ -1.78
CNTN1Q12860 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CNTN1Q12860 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN1Q12860 MIR670-201ENST00000390142 98 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.91□□□□□ -1.78
CNTN1Q12860 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN1Q12860 NANOGP6-201ENST00000429190 847 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 AC234064.1-201ENST00000436312 247 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.91□□□□□ -1.78
CNTN1Q12860 RPL7P28-201ENST00000437739 740 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.91□□□□□ -1.78
CNTN1Q12860 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 NDUFS5P3-201ENST00000450668 321 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 AC244505.3-201ENST00000454598 187 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.91□□□□□ -1.78
CNTN1Q12860 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.91□□□□□ -1.78
CNTN1Q12860 RPS20P21-201ENST00000466859 343 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN1Q12860 PRDX3P4-201ENST00000470828 747 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 ACTR3P3-201ENST00000480448 893 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.91□□□□□ -1.78
CNTN1Q12860 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
CNTN1Q12860 PRELID3BP6-201ENST00000503839 571 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 SNORD116-26-201ENST00000516006 96 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 SCARNA14-201ENST00000516903 136 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 TRMT10BP1-201ENST00000519377 943 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN1Q12860 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN1Q12860 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.91□□□□□ -1.78
CNTN1Q12860 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 AC087897.1-201ENST00000550134 156 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.91□□□□□ -1.78
CNTN1Q12860 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.91□□□□□ -1.78
CNTN1Q12860 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 MIR4512-201ENST00000583257 77 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN1Q12860 AC069431.2-201ENST00000604149 1099 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN1Q12860 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 AC005344.1-201ENST00000613391 459 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 AC233309.1-201ENST00000619522 751 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 AF001550.2-201ENST00000636643 217 ntBASIC3.91□□□□□ -1.78
CNTN1Q12860 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTN1Q12860 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.91□□□□□ -1.78
CNTN1Q12860 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTN1Q12860 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CNTN1Q12860 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CNTN1Q12860 AC025263.3-201ENST00000622965 1396 ntBASIC3.9□□□□□ -1.78
CNTN1Q12860 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.9□□□□□ -1.78
CNTN1Q12860 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms