Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEP78395 AC005332.6-201ENST00000613178 446 ntBASIC4.3□□□□□ -1.72
PRAMEP78395 AC107075.1-201ENST00000613695 314 ntBASIC4.3□□□□□ -1.72
PRAMEP78395 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.3□□□□□ -1.72
PRAMEP78395 AC008993.2-201ENST00000631744 806 ntBASIC4.3□□□□□ -1.72
PRAMEP78395 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEP78395 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEP78395 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.3□□□□□ -1.72
PRAMEP78395 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEP78395 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.3□□□□□ -1.72
PRAMEP78395 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEP78395 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEP78395 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEP78395 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEP78395 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEP78395 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PRAMEP78395 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEP78395 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEP78395 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEP78395 Y_RNA.465-201ENST00000384293 102 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 MIR124-3-201ENST00000384866 87 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AL023807.1-201ENST00000407932 359 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 RNA5SP80-201ENST00000410475 111 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.29□□□□□ -1.72
PRAMEP78395 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.29□□□□□ -1.72
PRAMEP78395 AC084290.1-201ENST00000434995 374 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.29□□□□□ -1.72
PRAMEP78395 RPL23AP52-201ENST00000439311 478 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AL353748.1-201ENST00000440753 474 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AL512326.1-201ENST00000443050 721 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.29□□□□□ -1.72
PRAMEP78395 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.29□□□□□ -1.72
PRAMEP78395 OFD1P3Y-201ENST00000453312 783 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 MTCO3P2-201ENST00000457365 171 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 RPL23AP2-201ENST00000471227 466 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AC020898.1-201ENST00000474167 787 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEP78395 RNF138P1-201ENST00000502765 546 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.29□□□□□ -1.72
PRAMEP78395 AC091951.3-201ENST00000504093 246 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AC006499.6-201ENST00000511169 607 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 RN7SKP31-201ENST00000516354 278 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 RNU6-1261P-201ENST00000517194 104 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.29□□□□□ -1.72
PRAMEP78395 IGLVIV-53-201ENST00000520107 367 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEP78395 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.29□□□□□ -1.72
PRAMEP78395 AC005832.3-201ENST00000537929 631 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.29□□□□□ -1.72
PRAMEP78395 MTND4P33-201ENST00000556706 766 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.29□□□□□ -1.72
PRAMEP78395 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.29□□□□□ -1.72
PRAMEP78395 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.29□□□□□ -1.72
PRAMEP78395 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.29□□□□□ -1.72
PRAMEP78395 MIR4443-201ENST00000585052 53 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 OR4G1P-201ENST00000588632 938 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.29□□□□□ -1.72
PRAMEP78395 AC234771.5-201ENST00000600161 514 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 BNIP3P26-201ENST00000600827 554 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.29□□□□□ -1.72
PRAMEP78395 LLPHP1-201ENST00000603571 367 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 AC091946.2-201ENST00000606105 291 ntBASIC4.29□□□□□ -1.72
PRAMEP78395 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.29□□□□□ -1.72
PRAMEP78395 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.29□□□□□ -1.72
PRAMEP78395 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEP78395 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEP78395 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEP78395 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PRAMEP78395 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEP78395 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.28□□□□□ -1.72
PRAMEP78395 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRAMEP78395 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.28□□□□□ -1.72
PRAMEP78395 AC107982.1-201ENST00000507171 1300 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PRAMEP78395 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRAMEP78395 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRAMEP78395 RNU6-560P-201ENST00000364007 108 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.28□□□□□ -1.72
PRAMEP78395 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PRAMEP78395 MIR1179-201ENST00000408703 91 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.28□□□□□ -1.72
PRAMEP78395 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.28□□□□□ -1.72
PRAMEP78395 SDCBPP2-201ENST00000424643 885 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 NANOGP6-201ENST00000429190 847 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.28□□□□□ -1.72
PRAMEP78395 AC104073.1-201ENST00000451988 151 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 AL645939.1-201ENST00000453429 797 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 RPL23AP24-201ENST00000458203 385 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 snoU13.1-201ENST00000459157 104 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 SNORD11.1-201ENST00000459482 85 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 RPL21P103-201ENST00000479921 488 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.28□□□□□ -1.72
PRAMEP78395 AC104164.2-201ENST00000496953 495 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 MTCO1P30-201ENST00000515244 580 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 IGKV2D-36-201ENST00000518643 226 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 AC027309.2-201ENST00000520566 192 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.28□□□□□ -1.72
PRAMEP78395 OR8L1P-201ENST00000534005 955 ntBASIC4.28□□□□□ -1.72
PRAMEP78395 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.28□□□□□ -1.72
PRAMEP78395 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms