Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.35□□□□□ -1.71
RIPK4P57078 MIR7112-201ENST00000616126 65 ntBASIC4.35□□□□□ -1.71
RIPK4P57078 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.35□□□□□ -1.71
RIPK4P57078 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RIPK4P57078 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.35□□□□□ -1.71
RIPK4P57078 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
RIPK4P57078 AC007529.1-201ENST00000418574 2178 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 AC017071.1-201ENST00000564407 2204 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.34□□□□□ -1.71
RIPK4P57078 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.34□□□□□ -1.71
RIPK4P57078 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RIPK4P57078 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RIPK4P57078 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RIPK4P57078 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RIPK4P57078 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RIPK4P57078 MT-TP-201ENST00000387461 68 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 RANP4-201ENST00000413361 655 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 PTP4A1P5-201ENST00000420305 455 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 AL513174.1-201ENST00000423182 629 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.34□□□□□ -1.71
RIPK4P57078 RPL23AP82-202ENST00000427528 469 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 Z99127.2-201ENST00000441426 334 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 AL591503.2-201ENST00000442314 1005 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 VN1R48P-201ENST00000448149 1036 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 BUD31P2-201ENST00000449374 300 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 CENPBD1P1-201ENST00000464061 469 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 RPL32P34-201ENST00000486380 400 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.34□□□□□ -1.71
RIPK4P57078 SNORA48.9-201ENST00000516419 162 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.34□□□□□ -1.71
RIPK4P57078 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.34□□□□□ -1.71
RIPK4P57078 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.34□□□□□ -1.71
RIPK4P57078 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.34□□□□□ -1.71
RIPK4P57078 AC022146.1-201ENST00000595307 847 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 HMGB1P51-201ENST00000605166 638 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.34□□□□□ -1.71
RIPK4P57078 AC103710.3-201ENST00000608157 948 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 AL118556.2-201ENST00000614375 824 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 AC009464.1-201ENST00000615731 469 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 AC092159.4-201ENST00000624944 550 ntBASIC4.34□□□□□ -1.71
RIPK4P57078 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
RIPK4P57078 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
RIPK4P57078 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RIPK4P57078 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RIPK4P57078 Y_RNA.333-201ENST00000365274 102 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RIPK4P57078 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.33□□□□□ -1.72
RIPK4P57078 MTCYBP7-201ENST00000419540 1134 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 RPL31P12-201ENST00000422587 358 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 RPL23AP4-201ENST00000427757 463 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 AC091862.1-201ENST00000438016 1100 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.33□□□□□ -1.72
RIPK4P57078 AC104978.1-201ENST00000449387 391 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 SNRPGP5-201ENST00000456003 220 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.33□□□□□ -1.72
RIPK4P57078 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.33□□□□□ -1.72
RIPK4P57078 OR8X1P-201ENST00000534542 869 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.33□□□□□ -1.72
RIPK4P57078 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.33□□□□□ -1.72
RIPK4P57078 AL606834.2-201ENST00000602954 668 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.33□□□□□ -1.72
RIPK4P57078 AC017076.1-201ENST00000607613 578 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 AL356274.1-201ENST00000617064 410 ntBASIC4.33□□□□□ -1.72
RIPK4P57078 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK4P57078 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK4P57078 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.32□□□□□ -1.72
RIPK4P57078 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK4P57078 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.32□□□□□ -1.72
RIPK4P57078 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK4P57078 AP002088.1-201ENST00000382740 395 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 AL357075.1-201ENST00000404107 726 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK4P57078 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK4P57078 RPS15AP6-201ENST00000420703 385 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK4P57078 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK4P57078 MTCO1P57-201ENST00000432182 261 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 AL353597.2-202ENST00000434901 373 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.32□□□□□ -1.72
RIPK4P57078 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.32□□□□□ -1.72
RIPK4P57078 AC021205.2-201ENST00000480069 347 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK4P57078 AC010285.3-201ENST00000511668 676 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.32□□□□□ -1.72
RIPK4P57078 RNU6-491P-201ENST00000516099 110 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 RNU6-362P-201ENST00000516736 90 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK4P57078 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK4P57078 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK4P57078 AC011602.1-201ENST00000546484 331 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK4P57078 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK4P57078 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.32□□□□□ -1.72
RIPK4P57078 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.32□□□□□ -1.72
RIPK4P57078 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.32□□□□□ -1.72
RIPK4P57078 uc_338.1-201ENST00000612113 180 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.32□□□□□ -1.72
RIPK4P57078 AC007342.8-201ENST00000623278 678 ntBASIC4.32□□□□□ -1.72
RIPK4P57078 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms