Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VCPP55072 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VCPP55072 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VCPP55072 UBE3AP2-201ENST00000429033 2259 ntBASIC4.14□□□□□ -1.75
VCPP55072 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
VCPP55072 RNU6-650P-201ENST00000365658 111 ntBASIC4.14□□□□□ -1.75
VCPP55072 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.14□□□□□ -1.75
VCPP55072 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VCPP55072 MIR128-1-201ENST00000384921 82 ntBASIC4.14□□□□□ -1.75
VCPP55072 SNORA40.4-201ENST00000390971 128 ntBASIC4.14□□□□□ -1.75
VCPP55072 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 AC234782.4-201ENST00000417646 1048 ntBASIC4.14□□□□□ -1.75
VCPP55072 AL121882.1-201ENST00000422893 417 ntBASIC4.14□□□□□ -1.75
VCPP55072 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 KCTD9P3-201ENST00000434597 1169 ntBASIC4.14□□□□□ -1.75
VCPP55072 AF228730.2-201ENST00000438784 848 ntBASIC4.14□□□□□ -1.75
VCPP55072 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 TPTE2P6-202ENST00000445572 1007 ntBASIC4.14□□□□□ -1.75
VCPP55072 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.14□□□□□ -1.75
VCPP55072 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.14□□□□□ -1.75
VCPP55072 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 RPL37P3-201ENST00000456825 293 ntBASIC4.14□□□□□ -1.75
VCPP55072 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 HSPD1P15-201ENST00000505573 1122 ntBASIC4.14□□□□□ -1.75
VCPP55072 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 Vault.1-201ENST00000516474 102 ntBASIC4.14□□□□□ -1.75
VCPP55072 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.14□□□□□ -1.75
VCPP55072 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.14□□□□□ -1.75
VCPP55072 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 AL121594.4-201ENST00000556211 1196 ntBASIC4.14□□□□□ -1.75
VCPP55072 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.14□□□□□ -1.75
VCPP55072 AC141257.3-201ENST00000572906 215 ntBASIC4.14□□□□□ -1.75
VCPP55072 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.14□□□□□ -1.75
VCPP55072 AP000919.1-202ENST00000581139 1264 ntBASIC4.14□□□□□ -1.75
VCPP55072 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.14□□□□□ -1.75
VCPP55072 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.14□□□□□ -1.75
VCPP55072 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 U6.48-201ENST00000618523 106 ntBASIC4.14□□□□□ -1.75
VCPP55072 AC124312.6-202ENST00000623624 418 ntBASIC4.14□□□□□ -1.75
VCPP55072 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 FRG1DP-201ENST00000635586 771 ntBASIC4.14□□□□□ -1.75
VCPP55072 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.14□□□□□ -1.75
VCPP55072 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VCPP55072 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
VCPP55072 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
VCPP55072 PRO1804-201ENST00000623780 2050 ntBASIC4.14□□□□□ -1.75
VCPP55072 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VCPP55072 GTF2H2B-203ENST00000508065 1432 ntBASIC4.13□□□□□ -1.75
VCPP55072 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VCPP55072 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
VCPP55072 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VCPP55072 RNA5SP322-201ENST00000363617 119 ntBASIC4.13□□□□□ -1.75
VCPP55072 HMGB1P10-201ENST00000395823 563 ntBASIC4.13□□□□□ -1.75
VCPP55072 HMGB3P19-201ENST00000403971 560 ntBASIC4.13□□□□□ -1.75
VCPP55072 RNU2-17P-201ENST00000410290 190 ntBASIC4.13□□□□□ -1.75
VCPP55072 PRELID3BP11-201ENST00000414230 479 ntBASIC4.13□□□□□ -1.75
VCPP55072 XKRYP4-201ENST00000414395 483 ntBASIC4.13□□□□□ -1.75
VCPP55072 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.13□□□□□ -1.75
VCPP55072 USP12PY-201ENST00000427677 1064 ntBASIC4.13□□□□□ -1.75
VCPP55072 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.13□□□□□ -1.75
VCPP55072 USP9YP7-201ENST00000436723 430 ntBASIC4.13□□□□□ -1.75
VCPP55072 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VCPP55072 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.13□□□□□ -1.75
VCPP55072 XKRYP5-201ENST00000449659 483 ntBASIC4.13□□□□□ -1.75
VCPP55072 USP9YP32-201ENST00000452432 430 ntBASIC4.13□□□□□ -1.75
VCPP55072 RPL5P24-201ENST00000463742 885 ntBASIC4.13□□□□□ -1.75
VCPP55072 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
VCPP55072 RPL7P24-201ENST00000493052 752 ntBASIC4.13□□□□□ -1.75
VCPP55072 AC068305.1-201ENST00000497406 726 ntBASIC4.13□□□□□ -1.75
VCPP55072 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.13□□□□□ -1.75
VCPP55072 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.13□□□□□ -1.75
VCPP55072 AC027338.1-201ENST00000514840 825 ntBASIC4.13□□□□□ -1.75
VCPP55072 RNA5SP179-201ENST00000517284 121 ntBASIC4.13□□□□□ -1.75
VCPP55072 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.13□□□□□ -1.75
VCPP55072 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.13□□□□□ -1.75
VCPP55072 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.13□□□□□ -1.75
VCPP55072 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.13□□□□□ -1.75
VCPP55072 AC079148.1-201ENST00000565944 819 ntBASIC4.13□□□□□ -1.75
VCPP55072 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.13□□□□□ -1.75
VCPP55072 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.13□□□□□ -1.75
VCPP55072 AC091167.4-201ENST00000605079 184 ntBASIC4.13□□□□□ -1.75
VCPP55072 AP001033.2-201ENST00000609701 1003 ntBASIC4.13□□□□□ -1.75
VCPP55072 AC097372.4-201ENST00000625025 466 ntBASIC4.13□□□□□ -1.75
VCPP55072 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.13□□□□□ -1.75
VCPP55072 MTND4P31-201ENST00000425607 1343 ntBASIC4.13□□□□□ -1.75
VCPP55072 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms