Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
BRCA1P38398 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.94□□□□□ -1.78
BRCA1P38398 AC103783.1-201ENST00000520506 373 ntBASIC3.94□□□□□ -1.78
BRCA1P38398 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.94□□□□□ -1.78
BRCA1P38398 AC115989.2-201ENST00000578640 563 ntBASIC3.94□□□□□ -1.78
BRCA1P38398 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.94□□□□□ -1.78
BRCA1P38398 MIR4727-201ENST00000622232 55 ntBASIC3.94□□□□□ -1.78
BRCA1P38398 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRCA1P38398 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.94□□□□□ -1.78
BRCA1P38398 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRCA1P38398 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCA1P38398 OR10AB1P-202ENST00000641219 1686 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCA1P38398 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCA1P38398 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCA1P38398 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
BRCA1P38398 AC013470.3-201ENST00000420252 1194 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCA1P38398 AL589765.3-201ENST00000446084 462 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 HMGB1P16-201ENST00000447155 540 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 RPL37P4-201ENST00000448908 268 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCA1P38398 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCA1P38398 FCF1P3-201ENST00000496394 590 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BRCA1P38398 AC021087.2-201ENST00000504656 1203 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCA1P38398 FAM106CP-201ENST00000582212 507 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
BRCA1P38398 BDH2P1-201ENST00000602288 736 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCA1P38398 IGHVIII-44-202ENST00000636235 289 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
BRCA1P38398 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCA1P38398 AL451142.2-201ENST00000429076 2090 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCA1P38398 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.93□□□□□ -1.78
BRCA1P38398 AC068647.1-201ENST00000489539 2265 ntBASIC3.93□□□□□ -1.78
BRCA1P38398 MIR1261-201ENST00000408659 82 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 RN7SKP222-201ENST00000410651 315 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.92□□□□□ -1.78
BRCA1P38398 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.92□□□□□ -1.78
BRCA1P38398 MTCO1P51-201ENST00000427672 1060 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 AC022022.1-201ENST00000430304 178 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCA1P38398 AC112492.1-201ENST00000449607 712 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 SLC31A1P1-201ENST00000451221 567 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 AC243772.1-201ENST00000451620 410 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 HMGB1P3-201ENST00000502802 616 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.92□□□□□ -1.78
BRCA1P38398 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCA1P38398 AC034159.1-201ENST00000513885 583 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.92□□□□□ -1.78
BRCA1P38398 AL157394.1-201ENST00000562983 1224 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCA1P38398 AC012213.4-201ENST00000606457 354 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
BRCA1P38398 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCA1P38398 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRCA1P38398 FAM35DP-201ENST00000323387 2712 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 RIOK3P1-201ENST00000418778 1528 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRCA1P38398 AC018555.1-201ENST00000567548 1980 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 OR5BR1P-201ENST00000524992 1330 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
BRCA1P38398 AL513302.2-201ENST00000562313 1842 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 CEP170P1-201ENST00000502249 4587 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
BRCA1P38398 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRCA1P38398 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
BRCA1P38398 AC004552.1-201ENST00000419089 348 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.92□□□□□ -1.78
BRCA1P38398 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.92□□□□□ -1.78
BRCA1P38398 RPS26P3-201ENST00000470205 348 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 AC090543.2-201ENST00000483963 348 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 AC004057.1-201ENST00000485827 348 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
BRCA1P38398 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCA1P38398 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.92□□□□□ -1.78
BRCA1P38398 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.92□□□□□ -1.78
BRCA1P38398 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.92□□□□□ -1.78
BRCA1P38398 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.92□□□□□ -1.78
BRCA1P38398 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.92□□□□□ -1.78
BRCA1P38398 OR2AS2P-201ENST00000606902 342 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 AC019131.2-201ENST00000609071 870 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 NF1P10-201ENST00000613227 742 ntBASIC3.92□□□□□ -1.78
BRCA1P38398 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
BRCA1P38398 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
BRCA1P38398 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BRCA1P38398 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
BRCA1P38398 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BRCA1P38398 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
BRCA1P38398 OR56A5-201ENST00000340110 738 ntBASIC3.91□□□□□ -1.78
BRCA1P38398 USP12PY-201ENST00000427677 1064 ntBASIC3.91□□□□□ -1.78
BRCA1P38398 AC011242.1-201ENST00000433596 1158 ntBASIC3.91□□□□□ -1.78
BRCA1P38398 CACYBPP1-201ENST00000438592 684 ntBASIC3.91□□□□□ -1.78
BRCA1P38398 AL357552.1-201ENST00000445254 415 ntBASIC3.91□□□□□ -1.78
BRCA1P38398 AL035551.1-201ENST00000446931 348 ntBASIC3.91□□□□□ -1.78
BRCA1P38398 AL139174.1-201ENST00000531489 886 ntBASIC3.91□□□□□ -1.78
BRCA1P38398 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms