Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBRP36941 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBRP36941 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LTBRP36941 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.35□□□□□ -1.55
LTBRP36941 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.35□□□□□ -1.55
LTBRP36941 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LTBRP36941 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.35□□□□□ -1.55
LTBRP36941 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LTBRP36941 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBRP36941 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBRP36941 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LTBRP36941 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LTBRP36941 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LTBRP36941 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBRP36941 AL137141.1-201ENST00000624622 4836 ntBASIC5.34□□□□□ -1.55
LTBRP36941 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBRP36941 Y_RNA.38-201ENST00000362617 102 ntBASIC5.34□□□□□ -1.55
LTBRP36941 RNU6-1103P-201ENST00000384150 107 ntBASIC5.34□□□□□ -1.55
LTBRP36941 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBRP36941 AL354868.1-201ENST00000417077 482 ntBASIC5.34□□□□□ -1.55
LTBRP36941 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBRP36941 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBRP36941 RPL23AP74-201ENST00000437246 471 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AC114755.5-201ENST00000447760 831 ntBASIC5.34□□□□□ -1.55
LTBRP36941 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBRP36941 AC023598.1-201ENST00000472521 361 ntBASIC5.34□□□□□ -1.55
LTBRP36941 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LTBRP36941 RPL12P20-201ENST00000475538 479 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AC007182.2-201ENST00000489251 402 ntBASIC5.34□□□□□ -1.55
LTBRP36941 STMN1P2-201ENST00000508435 439 ntBASIC5.34□□□□□ -1.55
LTBRP36941 GLUD1P3-202ENST00000508551 200 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AC091912.1-201ENST00000511351 248 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AC006427.1-201ENST00000514359 712 ntBASIC5.34□□□□□ -1.55
LTBRP36941 RNU6-358P-201ENST00000516564 75 ntBASIC5.34□□□□□ -1.55
LTBRP36941 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AC022861.1-201ENST00000522981 663 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.34□□□□□ -1.55
LTBRP36941 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBRP36941 OR8Q1P-201ENST00000526467 655 ntBASIC5.34□□□□□ -1.55
LTBRP36941 MTND1P35-201ENST00000526739 508 ntBASIC5.34□□□□□ -1.55
LTBRP36941 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBRP36941 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBRP36941 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LTBRP36941 AL512360.1-201ENST00000555346 234 ntBASIC5.34□□□□□ -1.55
LTBRP36941 NPM1P42-201ENST00000560329 862 ntBASIC5.34□□□□□ -1.55
LTBRP36941 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBRP36941 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBRP36941 FGF7P1-201ENST00000582820 288 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBRP36941 AC008752.3-201ENST00000588113 712 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LTBRP36941 AC007363.1-201ENST00000604736 620 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AL365503.1-201ENST00000605247 905 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AC008945.2-201ENST00000606056 604 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AC009994.1-201ENST00000606889 253 ntBASIC5.34□□□□□ -1.55
LTBRP36941 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LTBRP36941 AC104260.1-201ENST00000616660 539 ntBASIC5.34□□□□□ -1.55
LTBRP36941 AL732618.1-201ENST00000623251 301 ntBASIC5.34□□□□□ -1.55
LTBRP36941 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBRP36941 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBRP36941 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.34□□□□□ -1.55
LTBRP36941 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.34□□□□□ -1.55
LTBRP36941 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
LTBRP36941 AC139713.2-214ENST00000642059 1811 ntBASIC5.34□□□□□ -1.55
LTBRP36941 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LTBRP36941 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LTBRP36941 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.34□□□□□ -1.56
LTBRP36941 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
LTBRP36941 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LTBRP36941 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LTBRP36941 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LTBRP36941 AC006206.1-201ENST00000544842 3387 ntBASIC5.33□□□□□ -1.56
LTBRP36941 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LTBRP36941 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LTBRP36941 DHX40P1-201ENST00000588725 1412 ntBASIC5.33□□□□□ -1.56
LTBRP36941 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LTBRP36941 AC015799.1-201ENST00000622996 3122 ntBASIC5.33□□□□□ -1.56
LTBRP36941 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LTBRP36941 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LTBRP36941 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LTBRP36941 Y_RNA.46-201ENST00000362695 102 ntBASIC5.33□□□□□ -1.56
LTBRP36941 RNU6-1085P-201ENST00000363576 107 ntBASIC5.33□□□□□ -1.56
LTBRP36941 RNU6-534P-201ENST00000364877 106 ntBASIC5.33□□□□□ -1.56
LTBRP36941 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
LTBRP36941 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LTBRP36941 MIR298-201ENST00000401212 88 ntBASIC5.33□□□□□ -1.56
LTBRP36941 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.33□□□□□ -1.56
LTBRP36941 RNU2-41P-201ENST00000410991 178 ntBASIC5.33□□□□□ -1.56
LTBRP36941 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.33□□□□□ -1.56
LTBRP36941 AF186996.5-201ENST00000418098 904 ntBASIC5.33□□□□□ -1.56
LTBRP36941 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.33□□□□□ -1.56
LTBRP36941 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.33□□□□□ -1.56
LTBRP36941 BX323845.1-201ENST00000432417 179 ntBASIC5.33□□□□□ -1.56
LTBRP36941 AC093414.1-201ENST00000434712 514 ntBASIC5.33□□□□□ -1.56
LTBRP36941 CBX1P1-201ENST00000440184 427 ntBASIC5.33□□□□□ -1.56
LTBRP36941 RPS26P56-201ENST00000444468 240 ntBASIC5.33□□□□□ -1.56
LTBRP36941 SEPT7P3-201ENST00000455017 621 ntBASIC5.33□□□□□ -1.56
LTBRP36941 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.33□□□□□ -1.56
LTBRP36941 OR52A4P-201ENST00000472867 958 ntBASIC5.33□□□□□ -1.56
LTBRP36941 RN7SL817P-201ENST00000480777 288 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms