Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU7-143P-201ENST00000516781 65 ntBASIC3.68□□□□□ -1.82
SHC1P29353 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.68□□□□□ -1.82
SHC1P29353 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.68□□□□□ -1.82
SHC1P29353 AL049870.4-201ENST00000555741 486 ntBASIC3.68□□□□□ -1.82
SHC1P29353 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.68□□□□□ -1.82
SHC1P29353 AC079171.1-201ENST00000568788 914 ntBASIC3.68□□□□□ -1.82
SHC1P29353 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.68□□□□□ -1.82
SHC1P29353 AL022161.1-201ENST00000604390 213 ntBASIC3.68□□□□□ -1.82
SHC1P29353 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.68□□□□□ -1.82
SHC1P29353 AC096586.1-201ENST00000610267 561 ntBASIC3.68□□□□□ -1.82
SHC1P29353 AC023043.4-201ENST00000612081 449 ntBASIC3.68□□□□□ -1.82
SHC1P29353 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.68□□□□□ -1.82
SHC1P29353 FRG1HP-204ENST00000617940 757 ntBASIC3.68□□□□□ -1.82
SHC1P29353 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.68□□□□□ -1.82
SHC1P29353 AC007342.8-201ENST00000623278 678 ntBASIC3.68□□□□□ -1.82
SHC1P29353 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.68□□□□□ -1.82
SHC1P29353 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.68□□□□□ -1.82
SHC1P29353 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHC1P29353 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHC1P29353 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
SHC1P29353 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.68□□□□□ -1.82
SHC1P29353 AC093311.1-201ENST00000506586 2021 ntBASIC3.68□□□□□ -1.82
SHC1P29353 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHC1P29353 RLIMP1-201ENST00000339626 1680 ntBASIC3.68□□□□□ -1.82
SHC1P29353 MTND4P10-201ENST00000446199 1363 ntBASIC3.67□□□□□ -1.82
SHC1P29353 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHC1P29353 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.67□□□□□ -1.82
SHC1P29353 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHC1P29353 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHC1P29353 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHC1P29353 OR5H2-201ENST00000355273 945 ntBASIC3.67□□□□□ -1.82
SHC1P29353 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SHC1P29353 SNORD35B-201ENST00000363660 87 ntBASIC3.67□□□□□ -1.82
SHC1P29353 RNU4-51P-201ENST00000364206 140 ntBASIC3.67□□□□□ -1.82
SHC1P29353 Y_RNA.578-201ENST00000390903 88 ntBASIC3.67□□□□□ -1.82
SHC1P29353 MTCO1P56-201ENST00000401674 224 ntBASIC3.67□□□□□ -1.82
SHC1P29353 HMGB1P13-201ENST00000406019 642 ntBASIC3.67□□□□□ -1.82
SHC1P29353 RPL21P65-201ENST00000406094 466 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AC013404.1-201ENST00000413068 249 ntBASIC3.67□□□□□ -1.82
SHC1P29353 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.67□□□□□ -1.82
SHC1P29353 AL008987.1-201ENST00000415528 237 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AC009518.2-201ENST00000418056 731 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 AC009965.2-201ENST00000425328 970 ntBASIC3.67□□□□□ -1.82
SHC1P29353 RPS27AP12-201ENST00000429552 465 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 MOB1AP1-201ENST00000430903 535 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 TBCAP1-201ENST00000436520 327 ntBASIC3.67□□□□□ -1.82
SHC1P29353 PPIAP17-201ENST00000438507 471 ntBASIC3.67□□□□□ -1.82
SHC1P29353 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.67□□□□□ -1.82
SHC1P29353 AC097499.1-201ENST00000444277 208 ntBASIC3.67□□□□□ -1.82
SHC1P29353 PTENP1-201ENST00000447117 1215 ntBASIC3.67□□□□□ -1.82
SHC1P29353 HMGB1P16-201ENST00000447155 540 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AL050341.1-201ENST00000447743 313 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 RPL7P1-201ENST00000468161 747 ntBASIC3.67□□□□□ -1.82
SHC1P29353 RPL7P9-201ENST00000468715 747 ntBASIC3.67□□□□□ -1.82
SHC1P29353 PRDX3P4-201ENST00000470828 747 ntBASIC3.67□□□□□ -1.82
SHC1P29353 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHC1P29353 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.67□□□□□ -1.82
SHC1P29353 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 IGBP1P5-201ENST00000507524 1000 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.67□□□□□ -1.82
SHC1P29353 SNORD116-26-201ENST00000516006 96 ntBASIC3.67□□□□□ -1.82
SHC1P29353 RNU6-1004P-201ENST00000516584 111 ntBASIC3.67□□□□□ -1.82
SHC1P29353 MIR2114-201ENST00000516645 80 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AC135279.1-201ENST00000543493 504 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.67□□□□□ -1.82
SHC1P29353 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.67□□□□□ -1.82
SHC1P29353 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.67□□□□□ -1.82
SHC1P29353 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 AL109741.3-201ENST00000561748 592 ntBASIC3.67□□□□□ -1.82
SHC1P29353 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 AGGF1P6-201ENST00000569213 976 ntBASIC3.67□□□□□ -1.82
SHC1P29353 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHC1P29353 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.67□□□□□ -1.82
SHC1P29353 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.67□□□□□ -1.82
SHC1P29353 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.67□□□□□ -1.82
SHC1P29353 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 AC020910.2-201ENST00000603635 610 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AL451044.1-201ENST00000604867 238 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AC128687.2-201ENST00000609657 566 ntBASIC3.67□□□□□ -1.82
SHC1P29353 ZYXP1-201ENST00000617638 118 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AL731566.2-201ENST00000618971 317 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 AP002782.1-201ENST00000623107 614 ntBASIC3.67□□□□□ -1.82
SHC1P29353 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.67□□□□□ -1.82
SHC1P29353 AL121594.5-201ENST00000631724 573 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.67□□□□□ -1.82
SHC1P29353 AL773545.4-201ENST00000637262 310 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AC068137.4-201ENST00000638485 296 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AL513478.4-201ENST00000641636 310 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AL592437.2-201ENST00000421655 2434 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms