Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.28□□□□□ -1.72
ABCD3P28288 AL359757.1-201ENST00000623176 255 ntBASIC4.28□□□□□ -1.72
ABCD3P28288 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.28□□□□□ -1.72
ABCD3P28288 AC012618.3-205ENST00000637896 1496 ntBASIC4.28□□□□□ -1.72
ABCD3P28288 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ABCD3P28288 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ABCD3P28288 SALL4P2-201ENST00000423288 2910 ntBASIC4.28□□□□□ -1.72
ABCD3P28288 DDX43P2-201ENST00000604753 1354 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 MTCO1P14-201ENST00000441695 1559 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 AC108467.2-201ENST00000617640 1597 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ABCD3P28288 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ABCD3P28288 KPNA2P2-201ENST00000419546 1489 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ABCD3P28288 RNU1-83P-201ENST00000363426 164 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 RNA5SP397-201ENST00000391323 118 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 ATP5F1P4-201ENST00000397288 746 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 RPL31P1-201ENST00000398116 372 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 RSL24D1P4-201ENST00000400938 484 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 RPS16P5-201ENST00000406501 404 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ABCD3P28288 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.27□□□□□ -1.73
ABCD3P28288 RPL37P18-201ENST00000411602 243 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.27□□□□□ -1.73
ABCD3P28288 AC107081.1-201ENST00000414975 361 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.27□□□□□ -1.73
ABCD3P28288 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.27□□□□□ -1.73
ABCD3P28288 TDGF1P1-201ENST00000445734 527 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 snoU13.3-201ENST00000459441 104 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 MTCO2P6-201ENST00000463134 685 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 RN7SL354P-201ENST00000469282 294 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ABCD3P28288 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.27□□□□□ -1.73
ABCD3P28288 AC090453.1-201ENST00000495560 436 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.27□□□□□ -1.73
ABCD3P28288 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.27□□□□□ -1.73
ABCD3P28288 AC007016.1-201ENST00000512110 244 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 CDH12P4-201ENST00000517835 295 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 CDH12P3-201ENST00000517935 295 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 CDH12P1-201ENST00000518435 295 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.27□□□□□ -1.73
ABCD3P28288 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.27□□□□□ -1.73
ABCD3P28288 CYCSP2-201ENST00000558168 301 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.27□□□□□ -1.73
ABCD3P28288 MAGOH2P-202ENST00000584384 429 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 ELOCP35-201ENST00000604289 336 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 AL133338.2-201ENST00000604292 736 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 AC097505.1-201ENST00000610199 565 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 AL136981.2-201ENST00000617319 734 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ABCD3P28288 AC079416.3-201ENST00000624479 549 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 AL049536.1-201ENST00000625043 744 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.27□□□□□ -1.73
ABCD3P28288 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.27□□□□□ -1.73
ABCD3P28288 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.27□□□□□ -1.73
ABCD3P28288 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ABCD3P28288 AL133412.1-201ENST00000380194 2992 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ABCD3P28288 AC135352.1-201ENST00000506173 1418 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 AP002907.1-201ENST00000606361 1430 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 OR4G11P-202ENST00000642116 1414 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 AC017104.4-201ENST00000636283 1592 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ABCD3P28288 A2MP1-204ENST00000566278 4130 ntBASIC4.27□□□□□ -1.73
ABCD3P28288 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.26□□□□□ -1.73
ABCD3P28288 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCD3P28288 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCD3P28288 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCD3P28288 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCD3P28288 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCD3P28288 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCD3P28288 AL391684.1-202ENST00000641293 1636 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 AL592182.3-201ENST00000642132 3304 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ABCD3P28288 RNA5SP28-201ENST00000363841 119 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 SNORA4.1-201ENST00000364263 144 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 SNORA70F-201ENST00000384142 135 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 MIR192-201ENST00000384915 110 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 AL121834.1-202ENST00000404494 277 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 RNA5SP146-201ENST00000410743 123 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.26□□□□□ -1.73
ABCD3P28288 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.26□□□□□ -1.73
ABCD3P28288 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCD3P28288 AL953862.1-201ENST00000423016 168 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 AC006548.1-201ENST00000427470 102 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 FABP7P2-201ENST00000429946 379 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.26□□□□□ -1.73
ABCD3P28288 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.26□□□□□ -1.73
ABCD3P28288 AL354941.1-201ENST00000438600 464 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.26□□□□□ -1.73
ABCD3P28288 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.26□□□□□ -1.73
ABCD3P28288 VN1R32P-201ENST00000452234 905 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 AL109741.2-201ENST00000455561 343 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.26□□□□□ -1.73
ABCD3P28288 SCARNA10-201ENST00000459255 330 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 AC008897.1-201ENST00000494006 347 ntBASIC4.26□□□□□ -1.73
ABCD3P28288 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.26□□□□□ -1.73
ABCD3P28288 TMEM251P1-201ENST00000503717 318 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms