Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SNORA3.3-201ENST00000408712 125 ntBASIC3.52□□□□□ -1.85
GDF1P27539 MIR1183-201ENST00000408856 89 ntBASIC3.52□□□□□ -1.85
GDF1P27539 AMD1P2-201ENST00000412936 992 ntBASIC3.52□□□□□ -1.85
GDF1P27539 RPL30P3-201ENST00000424262 333 ntBASIC3.52□□□□□ -1.85
GDF1P27539 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.52□□□□□ -1.85
GDF1P27539 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.52□□□□□ -1.85
GDF1P27539 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.52□□□□□ -1.85
GDF1P27539 AL445584.1-201ENST00000431451 330 ntBASIC3.52□□□□□ -1.85
GDF1P27539 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
GDF1P27539 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.52□□□□□ -1.85
GDF1P27539 RRM2P4-201ENST00000441721 562 ntBASIC3.52□□□□□ -1.85
GDF1P27539 EXTL2P1-201ENST00000446218 416 ntBASIC3.52□□□□□ -1.85
GDF1P27539 SNORA84-201ENST00000459229 133 ntBASIC3.52□□□□□ -1.85
GDF1P27539 AC087385.1-201ENST00000475062 312 ntBASIC3.52□□□□□ -1.85
GDF1P27539 TRAV31-201ENST00000502780 342 ntBASIC3.52□□□□□ -1.85
GDF1P27539 UBE2V1P12-201ENST00000503954 474 ntBASIC3.52□□□□□ -1.85
GDF1P27539 AC111193.1-201ENST00000504097 155 ntBASIC3.52□□□□□ -1.85
GDF1P27539 AC110760.3-202ENST00000515177 371 ntBASIC3.52□□□□□ -1.85
GDF1P27539 RNA5SP309-201ENST00000516670 106 ntBASIC3.52□□□□□ -1.85
GDF1P27539 RNU6-352P-201ENST00000516908 107 ntBASIC3.52□□□□□ -1.85
GDF1P27539 AP001207.2-201ENST00000519490 539 ntBASIC3.52□□□□□ -1.85
GDF1P27539 AC022695.1-201ENST00000522089 237 ntBASIC3.52□□□□□ -1.85
GDF1P27539 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GDF1P27539 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GDF1P27539 OR8I1P-201ENST00000529291 931 ntBASIC3.52□□□□□ -1.85
GDF1P27539 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.52□□□□□ -1.85
GDF1P27539 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.52□□□□□ -1.85
GDF1P27539 POLR2KP1-201ENST00000553226 168 ntBASIC3.52□□□□□ -1.85
GDF1P27539 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
GDF1P27539 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.52□□□□□ -1.85
GDF1P27539 MIR4644-201ENST00000579929 84 ntBASIC3.52□□□□□ -1.85
GDF1P27539 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.52□□□□□ -1.85
GDF1P27539 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.52□□□□□ -1.85
GDF1P27539 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.52□□□□□ -1.85
GDF1P27539 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.52□□□□□ -1.85
GDF1P27539 AC128687.2-201ENST00000609657 566 ntBASIC3.52□□□□□ -1.85
GDF1P27539 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.52□□□□□ -1.85
GDF1P27539 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.52□□□□□ -1.85
GDF1P27539 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.52□□□□□ -1.85
GDF1P27539 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GDF1P27539 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.52□□□□□ -1.85
GDF1P27539 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.52□□□□□ -1.85
GDF1P27539 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GDF1P27539 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
GDF1P27539 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.52□□□□□ -1.85
GDF1P27539 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.52□□□□□ -1.85
GDF1P27539 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.51□□□□□ -1.85
GDF1P27539 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.51□□□□□ -1.85
GDF1P27539 ZNF962P-201ENST00000443465 3140 ntBASIC3.51□□□□□ -1.85
GDF1P27539 AC106871.1-201ENST00000568324 3102 ntBASIC3.51□□□□□ -1.85
GDF1P27539 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.51□□□□□ -1.85
GDF1P27539 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GDF1P27539 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
GDF1P27539 RNU6-317P-201ENST00000384031 107 ntBASIC3.51□□□□□ -1.85
GDF1P27539 MCTS2P-201ENST00000394552 546 ntBASIC3.51□□□□□ -1.85
GDF1P27539 MIR1303-201ENST00000408625 86 ntBASIC3.51□□□□□ -1.85
GDF1P27539 RNU2-6P-201ENST00000411404 190 ntBASIC3.51□□□□□ -1.85
GDF1P27539 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.51□□□□□ -1.85
GDF1P27539 USP9YP21-201ENST00000420603 432 ntBASIC3.51□□□□□ -1.85
GDF1P27539 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.51□□□□□ -1.85
GDF1P27539 MTCO2P23-201ENST00000425216 680 ntBASIC3.51□□□□□ -1.85
GDF1P27539 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.51□□□□□ -1.85
GDF1P27539 RPL7P4-203ENST00000430239 730 ntBASIC3.51□□□□□ -1.85
GDF1P27539 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.51□□□□□ -1.85
GDF1P27539 AL035246.1-201ENST00000433554 1255 ntBASIC3.51□□□□□ -1.85
GDF1P27539 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.51□□□□□ -1.85
GDF1P27539 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.51□□□□□ -1.85
GDF1P27539 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.51□□□□□ -1.85
GDF1P27539 AL606517.1-201ENST00000446914 387 ntBASIC3.51□□□□□ -1.85
GDF1P27539 AL050341.1-201ENST00000447743 313 ntBASIC3.51□□□□□ -1.85
GDF1P27539 snoU109.3-201ENST00000459477 145 ntBASIC3.51□□□□□ -1.85
GDF1P27539 RNU7-140P-201ENST00000459546 60 ntBASIC3.51□□□□□ -1.85
GDF1P27539 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.51□□□□□ -1.85
GDF1P27539 AL035404.1-201ENST00000497982 568 ntBASIC3.51□□□□□ -1.85
GDF1P27539 GTF2IP9-201ENST00000502460 301 ntBASIC3.51□□□□□ -1.85
GDF1P27539 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.51□□□□□ -1.85
GDF1P27539 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.51□□□□□ -1.85
GDF1P27539 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.51□□□□□ -1.85
GDF1P27539 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.51□□□□□ -1.85
GDF1P27539 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.51□□□□□ -1.85
GDF1P27539 AC010376.1-201ENST00000522101 334 ntBASIC3.51□□□□□ -1.85
GDF1P27539 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.51□□□□□ -1.85
GDF1P27539 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.51□□□□□ -1.85
GDF1P27539 AC095057.3-201ENST00000567102 1157 ntBASIC3.51□□□□□ -1.85
GDF1P27539 AC009101.1-201ENST00000568135 242 ntBASIC3.51□□□□□ -1.85
GDF1P27539 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.51□□□□□ -1.85
GDF1P27539 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.51□□□□□ -1.85
GDF1P27539 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.51□□□□□ -1.85
GDF1P27539 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GDF1P27539 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.51□□□□□ -1.85
GDF1P27539 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GDF1P27539 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GDF1P27539 AC012603.1-201ENST00000606424 528 ntBASIC3.51□□□□□ -1.85
GDF1P27539 AC013468.1-201ENST00000608680 598 ntBASIC3.51□□□□□ -1.85
GDF1P27539 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GDF1P27539 CYCSP41-201ENST00000616920 296 ntBASIC3.51□□□□□ -1.85
GDF1P27539 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GDF1P27539 AC139769.3-201ENST00000618383 175 ntBASIC3.51□□□□□ -1.85
GDF1P27539 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GDF1P27539 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms