Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.47□□□□□ -1.69
TNFSF4P23510 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF4P23510 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.47□□□□□ -1.69
TNFSF4P23510 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.47□□□□□ -1.69
TNFSF4P23510 RN7SL708P-201ENST00000580952 299 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 AC233702.9-201ENST00000581528 203 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.47□□□□□ -1.69
TNFSF4P23510 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF4P23510 AC245008.1-201ENST00000608123 476 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 AL391497.1-201ENST00000608671 547 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 AC009237.17-201ENST00000618111 748 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 AC018755.4-201ENST00000619715 454 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.47□□□□□ -1.69
TNFSF4P23510 AC012414.7-202ENST00000622705 1090 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 AL356121.2-201ENST00000624715 780 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 AC025048.6-202ENST00000627667 438 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 AC093591.3-201ENST00000634516 308 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF4P23510 MTND4P4-201ENST00000439033 1366 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF4P23510 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF4P23510 AC006206.1-201ENST00000544842 3387 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF4P23510 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF4P23510 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.47□□□□□ -1.69
TNFSF4P23510 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF4P23510 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF4P23510 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
TNFSF4P23510 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TNFSF4P23510 MAPK10-263ENST00000641052 4307 ntBASIC4.47□□□□□ -1.69
TNFSF4P23510 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF4P23510 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TNFSF4P23510 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TNFSF4P23510 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.46□□□□□ -1.69
TNFSF4P23510 AC027290.2-201ENST00000623210 18662 ntBASIC4.46□□□□□ -1.69
TNFSF4P23510 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TNFSF4P23510 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TNFSF4P23510 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
TNFSF4P23510 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
TNFSF4P23510 AC000123.3-201ENST00000624029 4975 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFSF4P23510 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 U3.4-201ENST00000363352 213 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 Y_RNA.201-201ENST00000364052 96 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 RNU6-853P-201ENST00000364306 107 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 RNU1-43P-201ENST00000365052 165 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 RNU6-1207P-201ENST00000384343 107 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 RNA5SP241-201ENST00000391326 114 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFSF4P23510 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF4P23510 RN7SKP126-201ENST00000411143 300 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 GPS2P1-201ENST00000411761 986 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 Z97055.1-201ENST00000419730 712 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 BX119904.4-201ENST00000424402 301 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFSF4P23510 AL445669.1-201ENST00000426743 755 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFSF4P23510 OR52B5P-201ENST00000435337 951 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 MTCO2P16-201ENST00000436962 677 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 AC108734.1-201ENST00000439549 399 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 COX6CP12-201ENST00000446748 202 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFSF4P23510 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFSF4P23510 AL645939.1-201ENST00000453429 797 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 RPS18P6-201ENST00000476880 458 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 S100A11P1-201ENST00000477525 312 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 AP000797.1-201ENST00000478870 387 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 RPL15P21-201ENST00000495592 567 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFSF4P23510 Vault.1-201ENST00000516474 102 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 RN7SKP260-201ENST00000516907 149 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 AC025881.1-201ENST00000518851 512 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFSF4P23510 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFSF4P23510 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF4P23510 AC128687.1-201ENST00000605304 619 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 AC068276.1-201ENST00000605793 379 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 AC090527.3-201ENST00000619041 548 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 AL356585.4-201ENST00000623078 1229 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 AL049536.1-201ENST00000625043 744 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 SAMMSON-227ENST00000642114 1199 ntBASIC4.46□□□□□ -1.7
TNFSF4P23510 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
TNFSF4P23510 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF4P23510 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF4P23510 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF4P23510 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF4P23510 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms