Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.53□□□□□ -1.36
RFX1P22670 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.53□□□□□ -1.36
RFX1P22670 AC022325.1-201ENST00000502748 2199 ntBASIC6.52□□□□□ -1.36
RFX1P22670 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RFX1P22670 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.52□□□□□ -1.37
RFX1P22670 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
RFX1P22670 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 OR52B3P-201ENST00000314715 928 ntBASIC6.52□□□□□ -1.37
RFX1P22670 NACAP2-201ENST00000318548 624 ntBASIC6.52□□□□□ -1.37
RFX1P22670 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.52□□□□□ -1.37
RFX1P22670 RNY3P13-201ENST00000365542 102 ntBASIC6.52□□□□□ -1.37
RFX1P22670 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.52□□□□□ -1.37
RFX1P22670 MIR19A-201ENST00000384878 82 ntBASIC6.52□□□□□ -1.37
RFX1P22670 ENSAP1-201ENST00000392855 326 ntBASIC6.52□□□□□ -1.37
RFX1P22670 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.52□□□□□ -1.37
RFX1P22670 RPL35AP31-201ENST00000418340 337 ntBASIC6.52□□□□□ -1.37
RFX1P22670 RPL12P34-201ENST00000424532 479 ntBASIC6.52□□□□□ -1.37
RFX1P22670 RPL5P25-201ENST00000441148 775 ntBASIC6.52□□□□□ -1.37
RFX1P22670 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.52□□□□□ -1.37
RFX1P22670 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.52□□□□□ -1.37
RFX1P22670 AC016027.4-201ENST00000450866 277 ntBASIC6.52□□□□□ -1.37
RFX1P22670 GMFBP1-201ENST00000467831 427 ntBASIC6.52□□□□□ -1.37
RFX1P22670 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RFX1P22670 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.52□□□□□ -1.37
RFX1P22670 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.52□□□□□ -1.37
RFX1P22670 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.52□□□□□ -1.37
RFX1P22670 IGLVIV-53-201ENST00000520107 367 ntBASIC6.52□□□□□ -1.37
RFX1P22670 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.52□□□□□ -1.37
RFX1P22670 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.52□□□□□ -1.37
RFX1P22670 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.52□□□□□ -1.37
RFX1P22670 HPRT1P3-201ENST00000539521 576 ntBASIC6.52□□□□□ -1.37
RFX1P22670 AC023050.3-201ENST00000541142 333 ntBASIC6.52□□□□□ -1.37
RFX1P22670 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.52□□□□□ -1.37
RFX1P22670 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.52□□□□□ -1.37
RFX1P22670 MIR4716-201ENST00000579628 84 ntBASIC6.52□□□□□ -1.37
RFX1P22670 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.52□□□□□ -1.37
RFX1P22670 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.52□□□□□ -1.37
RFX1P22670 AC096861.1-201ENST00000616652 240 ntBASIC6.52□□□□□ -1.37
RFX1P22670 AC002550.2-201ENST00000621246 394 ntBASIC6.52□□□□□ -1.37
RFX1P22670 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RFX1P22670 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
RFX1P22670 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RFX1P22670 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX1P22670 AC235565.1-201ENST00000456962 1325 ntBASIC6.51□□□□□ -1.37
RFX1P22670 NXPH1-205ENST00000602349 1953 ntBASIC6.51□□□□□ -1.37
RFX1P22670 RBPJP7-201ENST00000442803 1447 ntBASIC6.51□□□□□ -1.37
RFX1P22670 RBPJP5-201ENST00000449433 1447 ntBASIC6.51□□□□□ -1.37
RFX1P22670 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 FRG1CP-201ENST00000358464 769 ntBASIC6.51□□□□□ -1.37
RFX1P22670 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RFX1P22670 SNORA21-201ENST00000362423 132 ntBASIC6.51□□□□□ -1.37
RFX1P22670 RNA5SP477-201ENST00000362639 119 ntBASIC6.51□□□□□ -1.37
RFX1P22670 RNU1-134P-201ENST00000362935 165 ntBASIC6.51□□□□□ -1.37
RFX1P22670 RNA5SP375-201ENST00000362975 119 ntBASIC6.51□□□□□ -1.37
RFX1P22670 SNORA74A-201ENST00000364089 198 ntBASIC6.51□□□□□ -1.37
RFX1P22670 U3.11-201ENST00000364476 212 ntBASIC6.51□□□□□ -1.37
RFX1P22670 RNU6-332P-201ENST00000391193 108 ntBASIC6.51□□□□□ -1.37
RFX1P22670 RNU6-510P-201ENST00000391239 108 ntBASIC6.51□□□□□ -1.37
RFX1P22670 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RFX1P22670 MIR1302-11-201ENST00000408051 138 ntBASIC6.51□□□□□ -1.37
RFX1P22670 MIR1302-9-201ENST00000408365 138 ntBASIC6.51□□□□□ -1.37
RFX1P22670 MIR1302-10-201ENST00000408734 138 ntBASIC6.51□□□□□ -1.37
RFX1P22670 HMGN1P24-201ENST00000412282 298 ntBASIC6.51□□□□□ -1.37
RFX1P22670 RPS15AP40-201ENST00000419621 391 ntBASIC6.51□□□□□ -1.37
RFX1P22670 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.51□□□□□ -1.37
RFX1P22670 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.51□□□□□ -1.37
RFX1P22670 AL049714.1-201ENST00000466686 347 ntBASIC6.51□□□□□ -1.37
RFX1P22670 SNORA19.2-201ENST00000516013 114 ntBASIC6.51□□□□□ -1.37
RFX1P22670 RN7SKP82-201ENST00000516786 223 ntBASIC6.51□□□□□ -1.37
RFX1P22670 AC105029.1-201ENST00000520250 669 ntBASIC6.51□□□□□ -1.37
RFX1P22670 OR4P1P-201ENST00000530808 1136 ntBASIC6.51□□□□□ -1.37
RFX1P22670 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.51□□□□□ -1.37
RFX1P22670 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.51□□□□□ -1.37
RFX1P22670 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.51□□□□□ -1.37
RFX1P22670 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.51□□□□□ -1.37
RFX1P22670 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.51□□□□□ -1.37
RFX1P22670 RPA2P1-201ENST00000556557 721 ntBASIC6.51□□□□□ -1.37
RFX1P22670 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.51□□□□□ -1.37
RFX1P22670 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.51□□□□□ -1.37
RFX1P22670 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.51□□□□□ -1.37
RFX1P22670 COX6CP3-201ENST00000580869 223 ntBASIC6.51□□□□□ -1.37
RFX1P22670 MIR4701-201ENST00000583094 63 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms