Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH3P22223 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDH3P22223 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDH3P22223 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH3P22223 RNA5SP388-201ENST00000362584 119 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH3P22223 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH3P22223 OR1L1-202ENST00000373686 1083 ntBASIC4.08□□□□□ -1.76
CDH3P22223 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDH3P22223 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDH3P22223 SNORD66.1-201ENST00000391230 76 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AL022722.2-201ENST00000402519 180 ntBASIC4.08□□□□□ -1.76
CDH3P22223 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH3P22223 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CDH3P22223 AL161631.1-201ENST00000417933 486 ntBASIC4.08□□□□□ -1.76
CDH3P22223 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.08□□□□□ -1.76
CDH3P22223 PRELID3BP10-201ENST00000431957 584 ntBASIC4.08□□□□□ -1.76
CDH3P22223 ELOCP11-201ENST00000436690 332 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AF228730.2-201ENST00000438784 848 ntBASIC4.08□□□□□ -1.76
CDH3P22223 ELOCP16-201ENST00000444494 332 ntBASIC4.08□□□□□ -1.76
CDH3P22223 NUTF2P7-201ENST00000453086 375 ntBASIC4.08□□□□□ -1.76
CDH3P22223 RPS7P7-201ENST00000463499 571 ntBASIC4.08□□□□□ -1.76
CDH3P22223 RPS27P23-201ENST00000487608 251 ntBASIC4.08□□□□□ -1.76
CDH3P22223 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH3P22223 AC134050.1-201ENST00000495088 933 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH3P22223 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH3P22223 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH3P22223 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH3P22223 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH3P22223 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH3P22223 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH3P22223 IGKV2D-23-201ENST00000518179 286 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH3P22223 AC105233.3-201ENST00000531125 744 ntBASIC4.08□□□□□ -1.76
CDH3P22223 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH3P22223 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH3P22223 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH3P22223 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH3P22223 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH3P22223 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH3P22223 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH3P22223 AC007224.1-201ENST00000564410 144 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH3P22223 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH3P22223 AL583856.2-201ENST00000606298 543 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH3P22223 AP000238.1-201ENST00000608759 426 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AC009237.15-201ENST00000610252 501 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AC012531.5-201ENST00000611375 151 ntBASIC4.08□□□□□ -1.76
CDH3P22223 ZYXP1-201ENST00000617638 118 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AC010975.3-201ENST00000618727 978 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AC068787.1-201ENST00000623908 691 ntBASIC4.08□□□□□ -1.76
CDH3P22223 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH3P22223 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH3P22223 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CDH3P22223 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CDH3P22223 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH3P22223 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH3P22223 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CDH3P22223 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 AL049737.1-201ENST00000413920 1403 ntBASIC4.07□□□□□ -1.76
CDH3P22223 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH3P22223 AL512646.1-201ENST00000269395 1077 ntBASIC4.07□□□□□ -1.76
CDH3P22223 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH3P22223 MIR423-201ENST00000362201 94 ntBASIC4.07□□□□□ -1.76
CDH3P22223 Y_RNA.472-201ENST00000384322 102 ntBASIC4.07□□□□□ -1.76
CDH3P22223 RNU4-22P-201ENST00000411058 166 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AC108032.1-201ENST00000416706 207 ntBASIC4.07□□□□□ -1.76
CDH3P22223 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH3P22223 PTP4A1P5-201ENST00000420305 455 ntBASIC4.07□□□□□ -1.76
CDH3P22223 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH3P22223 RBMY1KP-201ENST00000423480 476 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AC092648.1-201ENST00000425870 423 ntBASIC4.07□□□□□ -1.76
CDH3P22223 COX6CP15-201ENST00000426313 211 ntBASIC4.07□□□□□ -1.76
CDH3P22223 MTND2P5-201ENST00000432656 1006 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AC023347.2-201ENST00000433994 462 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.07□□□□□ -1.76
CDH3P22223 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 AF213884.1-201ENST00000488102 463 ntBASIC4.07□□□□□ -1.76
CDH3P22223 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 RPL5P23-201ENST00000496040 868 ntBASIC4.07□□□□□ -1.76
CDH3P22223 RPS27AP13-201ENST00000498403 237 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH3P22223 AC099522.1-202ENST00000514718 367 ntBASIC4.07□□□□□ -1.76
CDH3P22223 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH3P22223 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH3P22223 AL442163.2-201ENST00000553912 710 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH3P22223 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH3P22223 AC006270.2-201ENST00000578523 652 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH3P22223 AC007687.1-201ENST00000602704 304 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AL020997.3-201ENST00000602843 359 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms