Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR181B1-201ENST00000385240 110 ntBASIC2.57□□□□□ -2
CXCL1P09341 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.57□□□□□ -2
CXCL1P09341 RN7SKP156-201ENST00000410308 342 ntBASIC2.57□□□□□ -2
CXCL1P09341 RN7SKP111-201ENST00000410349 271 ntBASIC2.57□□□□□ -2
CXCL1P09341 EI24P1-201ENST00000416584 867 ntBASIC2.57□□□□□ -2
CXCL1P09341 HMGB1P45-201ENST00000435986 653 ntBASIC2.57□□□□□ -2
CXCL1P09341 AL031663.1-201ENST00000437445 219 ntBASIC2.57□□□□□ -2
CXCL1P09341 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.57□□□□□ -2
CXCL1P09341 HMGB3P6-201ENST00000444896 598 ntBASIC2.57□□□□□ -2
CXCL1P09341 RPL29P29-201ENST00000448725 423 ntBASIC2.57□□□□□ -2
CXCL1P09341 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.57□□□□□ -2
CXCL1P09341 RPS20P21-201ENST00000466859 343 ntBASIC2.57□□□□□ -2
CXCL1P09341 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.57□□□□□ -2
CXCL1P09341 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC2.57□□□□□ -2
CXCL1P09341 AC010285.3-201ENST00000511668 676 ntBASIC2.57□□□□□ -2
CXCL1P09341 APOOP4-201ENST00000513530 597 ntBASIC2.57□□□□□ -2
CXCL1P09341 SNORA31.9-201ENST00000516429 84 ntBASIC2.57□□□□□ -2
CXCL1P09341 AC034205.1-201ENST00000520621 638 ntBASIC2.57□□□□□ -2
CXCL1P09341 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.57□□□□□ -2
CXCL1P09341 AC010198.2-201ENST00000550612 259 ntBASIC2.57□□□□□ -2
CXCL1P09341 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.57□□□□□ -2
CXCL1P09341 AC067852.3-201ENST00000589177 561 ntBASIC2.57□□□□□ -2
CXCL1P09341 AC011468.4-201ENST00000603942 409 ntBASIC2.57□□□□□ -2
CXCL1P09341 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.57□□□□□ -2
CXCL1P09341 AL391497.1-201ENST00000608671 547 ntBASIC2.57□□□□□ -2
CXCL1P09341 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CXCL1P09341 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CXCL1P09341 FP236240.3-201ENST00000623061 327 ntBASIC2.57□□□□□ -2
CXCL1P09341 AC073342.3-201ENST00000624211 193 ntBASIC2.57□□□□□ -2
CXCL1P09341 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.57□□□□□ -2
CXCL1P09341 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.57□□□□□ -2
CXCL1P09341 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.57□□□□□ -2
CXCL1P09341 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.57□□□□□ -2
CXCL1P09341 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CXCL1P09341 GTF2H2B-203ENST00000508065 1432 ntBASIC2.57□□□□□ -2
CXCL1P09341 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.57□□□□□ -2
CXCL1P09341 AC006042.3-201ENST00000454684 1469 ntBASIC2.57□□□□□ -2
CXCL1P09341 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CXCL1P09341 AC032011.1-201ENST00000611703 1549 ntBASIC2.57□□□□□ -2
CXCL1P09341 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.57□□□□□ -2
CXCL1P09341 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.57□□□□□ -2
CXCL1P09341 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
CXCL1P09341 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.56□□□□□ -2
CXCL1P09341 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXCL1P09341 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CXCL1P09341 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.56□□□□□ -2
CXCL1P09341 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
CXCL1P09341 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CXCL1P09341 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CXCL1P09341 MIR887-201ENST00000401258 79 ntBASIC2.56□□□□□ -2
CXCL1P09341 Z99755.1-201ENST00000414048 380 ntBASIC2.56□□□□□ -2
CXCL1P09341 XKRYP4-201ENST00000414395 483 ntBASIC2.56□□□□□ -2
CXCL1P09341 MTND2P16-201ENST00000419987 799 ntBASIC2.56□□□□□ -2
CXCL1P09341 AL356806.1-201ENST00000422524 916 ntBASIC2.56□□□□□ -2
CXCL1P09341 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.56□□□□□ -2
CXCL1P09341 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.56□□□□□ -2
CXCL1P09341 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.56□□□□□ -2
CXCL1P09341 MTCO1P43-201ENST00000431831 488 ntBASIC2.56□□□□□ -2
CXCL1P09341 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.56□□□□□ -2
CXCL1P09341 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.56□□□□□ -2
CXCL1P09341 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.56□□□□□ -2
CXCL1P09341 ARL5AP2-201ENST00000444698 533 ntBASIC2.56□□□□□ -2
CXCL1P09341 COX6CP2-201ENST00000444980 225 ntBASIC2.56□□□□□ -2
CXCL1P09341 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.56□□□□□ -2
CXCL1P09341 XKRYP5-201ENST00000449659 483 ntBASIC2.56□□□□□ -2
CXCL1P09341 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC2.56□□□□□ -2
CXCL1P09341 RPL31P53-201ENST00000457065 348 ntBASIC2.56□□□□□ -2
CXCL1P09341 AC006483.1-201ENST00000487308 313 ntBASIC2.56□□□□□ -2
CXCL1P09341 AL139099.1-201ENST00000497398 403 ntBASIC2.56□□□□□ -2
CXCL1P09341 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.56□□□□□ -2
CXCL1P09341 HMGB3P15-201ENST00000507326 574 ntBASIC2.56□□□□□ -2
CXCL1P09341 AC113398.2-201ENST00000507630 558 ntBASIC2.56□□□□□ -2
CXCL1P09341 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.56□□□□□ -2
CXCL1P09341 AC090071.1-201ENST00000507713 644 ntBASIC2.56□□□□□ -2
CXCL1P09341 ACTR6P1-201ENST00000514311 1104 ntBASIC2.56□□□□□ -2
CXCL1P09341 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.56□□□□□ -2
CXCL1P09341 RNU6-352P-201ENST00000516908 107 ntBASIC2.56□□□□□ -2
CXCL1P09341 RPL12P22-201ENST00000519073 490 ntBASIC2.56□□□□□ -2
CXCL1P09341 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.56□□□□□ -2
CXCL1P09341 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.56□□□□□ -2
CXCL1P09341 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.56□□□□□ -2
CXCL1P09341 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.56□□□□□ -2
CXCL1P09341 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.56□□□□□ -2
CXCL1P09341 AC034268.2-201ENST00000571784 482 ntBASIC2.56□□□□□ -2
CXCL1P09341 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.56□□□□□ -2
CXCL1P09341 MIR3939-201ENST00000582614 106 ntBASIC2.56□□□□□ -2
CXCL1P09341 AC113194.1-201ENST00000606037 500 ntBASIC2.56□□□□□ -2
CXCL1P09341 AL451074.6-201ENST00000608512 729 ntBASIC2.56□□□□□ -2
CXCL1P09341 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXCL1P09341 AC245389.2-201ENST00000616023 576 ntBASIC2.56□□□□□ -2
CXCL1P09341 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXCL1P09341 AC243756.2-201ENST00000618406 463 ntBASIC2.56□□□□□ -2
CXCL1P09341 AC242843.1-201ENST00000618702 573 ntBASIC2.56□□□□□ -2
CXCL1P09341 AL356490.1-201ENST00000623079 479 ntBASIC2.56□□□□□ -2
CXCL1P09341 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.56□□□□□ -2
CXCL1P09341 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.56□□□□□ -2
CXCL1P09341 AL392088.2-201ENST00000637607 285 ntBASIC2.56□□□□□ -2
CXCL1P09341 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CXCL1P09341 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXCL1P09341 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms