Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFAP04085 RNU6-179P-201ENST00000363350 107 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 SNORD116-29-201ENST00000384516 83 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 RNY4P36-201ENST00000391116 96 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 RPS4XP9-201ENST00000405151 780 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 RN7SKP144-201ENST00000411108 279 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 RPL31P2-201ENST00000413849 377 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 RPS17P17-201ENST00000419392 409 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 Z82205.1-201ENST00000428456 297 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.83□□□□□ -1.48
PDGFAP04085 MTND3P2-201ENST00000438452 342 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 Z95327.1-201ENST00000446082 482 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 VPS25P1-201ENST00000455691 508 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFAP04085 AC079804.1-201ENST00000461922 436 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AL163540.1-201ENST00000485382 386 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AC083904.1-201ENST00000487828 231 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.83□□□□□ -1.48
PDGFAP04085 HMGB3P15-201ENST00000507326 574 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AC110792.2-201ENST00000510278 224 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 KHDC1P1-201ENST00000511053 508 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AC005741.1-201ENST00000511094 432 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AC114781.3-201ENST00000512083 142 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.83□□□□□ -1.48
PDGFAP04085 RNA5SP271-201ENST00000516700 88 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 IGLVIV-53-201ENST00000520107 367 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 IGHV4-55-201ENST00000520889 368 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 MTND4P7-201ENST00000523876 130 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 DEFB109D-201ENST00000529497 240 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AC092375.1-201ENST00000550410 637 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFAP04085 AC005332.4-201ENST00000592752 579 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PDGFAP04085 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.83□□□□□ -1.48
PDGFAP04085 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AL627309.6-201ENST00000606857 840 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFAP04085 MIR6768-201ENST00000610734 72 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AC006924.1-201ENST00000610750 559 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 U1.25-201ENST00000614085 162 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 uc_338.34-201ENST00000617467 174 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AC127024.6-201ENST00000621598 424 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AC131009.3-201ENST00000621809 287 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFAP04085 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFAP04085 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PDGFAP04085 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.83□□□□□ -1.48
PDGFAP04085 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFAP04085 AC010168.2-201ENST00000562691 5428 ntBASIC5.83□□□□□ -1.48
PDGFAP04085 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PDGFAP04085 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PDGFAP04085 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.83□□□□□ -1.48
PDGFAP04085 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFAP04085 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PDGFAP04085 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFAP04085 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFAP04085 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PDGFAP04085 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.83□□□□□ -1.48
PDGFAP04085 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PDGFAP04085 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFAP04085 SAGE4P-201ENST00000442271 3381 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PDGFAP04085 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 SNORD16-201ENST00000362803 99 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 RNU6-254P-201ENST00000363377 107 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 Y_RNA.144-201ENST00000363521 113 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 AL136372.1-201ENST00000403060 228 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 DPPA2P2-201ENST00000418220 897 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 AC007568.1-201ENST00000422912 471 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFAP04085 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFAP04085 PRPS1P1-201ENST00000445305 876 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 AC107399.1-201ENST00000451226 265 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 RN7SL273P-201ENST00000481561 299 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 UBA52P7-201ENST00000486088 380 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 AC008945.1-201ENST00000505144 499 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.82□□□□□ -1.48
PDGFAP04085 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.82□□□□□ -1.48
PDGFAP04085 Y_RNA.667-201ENST00000516212 107 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.82□□□□□ -1.48
PDGFAP04085 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.82□□□□□ -1.48
PDGFAP04085 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDGFAP04085 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFAP04085 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFAP04085 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.82□□□□□ -1.48
PDGFAP04085 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFAP04085 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFAP04085 MIR4443-201ENST00000585052 53 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFAP04085 SNORA74.4-201ENST00000607595 199 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.82□□□□□ -1.48
PDGFAP04085 AC093838.1-201ENST00000613014 469 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 AC037198.3-201ENST00000616754 526 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms