Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RPL30P2-201ENST00000414021 291 ntBASIC3.15□□□□□ -1.91
TNFP01375 HSFY1P1-201ENST00000423928 1178 ntBASIC3.15□□□□□ -1.91
TNFP01375 RPL7P44-201ENST00000424827 742 ntBASIC3.15□□□□□ -1.91
TNFP01375 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFP01375 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFP01375 USP9YP7-201ENST00000436723 430 ntBASIC3.15□□□□□ -1.91
TNFP01375 AC006994.1-201ENST00000438212 839 ntBASIC3.15□□□□□ -1.91
TNFP01375 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TNFP01375 ELOCP23-201ENST00000452014 332 ntBASIC3.15□□□□□ -1.91
TNFP01375 USP9YP32-201ENST00000452432 430 ntBASIC3.15□□□□□ -1.91
TNFP01375 AC006445.1-201ENST00000491925 405 ntBASIC3.15□□□□□ -1.91
TNFP01375 RPL7P23-201ENST00000493874 747 ntBASIC3.15□□□□□ -1.91
TNFP01375 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.15□□□□□ -1.91
TNFP01375 GMPSP1-201ENST00000514075 579 ntBASIC3.15□□□□□ -1.91
TNFP01375 RNA5SP341-201ENST00000516261 117 ntBASIC3.15□□□□□ -1.91
TNFP01375 RNA5SP309-201ENST00000516670 106 ntBASIC3.15□□□□□ -1.91
TNFP01375 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFP01375 SNORD39.2-201ENST00000579995 76 ntBASIC3.15□□□□□ -1.91
TNFP01375 MIR2682-201ENST00000580305 110 ntBASIC3.15□□□□□ -1.91
TNFP01375 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFP01375 AC011471.1-201ENST00000585766 187 ntBASIC3.15□□□□□ -1.91
TNFP01375 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFP01375 OR2BH1P-201ENST00000608850 864 ntBASIC3.15□□□□□ -1.91
TNFP01375 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFP01375 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFP01375 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TNFP01375 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TNFP01375 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFP01375 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFP01375 AL136964.1-201ENST00000622038 2990 ntBASIC3.14□□□□□ -1.91
TNFP01375 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TNFP01375 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TNFP01375 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFP01375 AC127526.1-201ENST00000417526 366 ntBASIC3.14□□□□□ -1.91
TNFP01375 AC013268.2-201ENST00000420753 337 ntBASIC3.14□□□□□ -1.91
TNFP01375 AL353705.1-201ENST00000433468 480 ntBASIC3.14□□□□□ -1.91
TNFP01375 AL035551.1-201ENST00000446931 348 ntBASIC3.14□□□□□ -1.91
TNFP01375 Z99127.3-201ENST00000448158 395 ntBASIC3.14□□□□□ -1.91
TNFP01375 CLIC4P1-201ENST00000453177 535 ntBASIC3.14□□□□□ -1.91
TNFP01375 SEPT7P6-201ENST00000469999 1143 ntBASIC3.14□□□□□ -1.91
TNFP01375 AC087385.1-201ENST00000475062 312 ntBASIC3.14□□□□□ -1.91
TNFP01375 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.14□□□□□ -1.91
TNFP01375 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFP01375 AC016550.3-201ENST00000515706 767 ntBASIC3.14□□□□□ -1.91
TNFP01375 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.14□□□□□ -1.91
TNFP01375 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TNFP01375 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.14□□□□□ -1.91
TNFP01375 AL121594.4-201ENST00000556211 1196 ntBASIC3.14□□□□□ -1.91
TNFP01375 AC084757.1-201ENST00000559987 490 ntBASIC3.14□□□□□ -1.91
TNFP01375 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFP01375 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.14□□□□□ -1.91
TNFP01375 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFP01375 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.14□□□□□ -1.91
TNFP01375 BMS1P7-201ENST00000602440 1052 ntBASIC3.14□□□□□ -1.91
TNFP01375 AC083899.3-201ENST00000603413 594 ntBASIC3.14□□□□□ -1.91
TNFP01375 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFP01375 AC135507.2-201ENST00000612443 309 ntBASIC3.14□□□□□ -1.91
TNFP01375 RNVU1-4-201ENST00000612985 164 ntBASIC3.14□□□□□ -1.91
TNFP01375 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.14□□□□□ -1.91
TNFP01375 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFP01375 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFP01375 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFP01375 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFP01375 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFP01375 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
TNFP01375 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TNFP01375 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TNFP01375 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TNFP01375 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.13□□□□□ -1.91
TNFP01375 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.13□□□□□ -1.91
TNFP01375 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TNFP01375 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TNFP01375 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFP01375 AL138885.1-201ENST00000405921 675 ntBASIC3.13□□□□□ -1.91
TNFP01375 RNU6-603P-201ENST00000411403 107 ntBASIC3.13□□□□□ -1.91
TNFP01375 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.13□□□□□ -1.91
TNFP01375 AL138785.1-201ENST00000425821 331 ntBASIC3.13□□□□□ -1.91
TNFP01375 ETF1P3-201ENST00000430422 1160 ntBASIC3.13□□□□□ -1.91
TNFP01375 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.13□□□□□ -1.91
TNFP01375 RPL7P31-201ENST00000450192 724 ntBASIC3.13□□□□□ -1.91
TNFP01375 AL354710.1-201ENST00000453641 246 ntBASIC3.13□□□□□ -1.91
TNFP01375 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFP01375 S100A11P2-201ENST00000467589 312 ntBASIC3.13□□□□□ -1.91
TNFP01375 PRDX3P4-201ENST00000470828 747 ntBASIC3.13□□□□□ -1.91
TNFP01375 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.13□□□□□ -1.91
TNFP01375 NDUFB4P9-201ENST00000511646 388 ntBASIC3.13□□□□□ -1.91
TNFP01375 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.13□□□□□ -1.91
TNFP01375 LDHBP3-201ENST00000514909 822 ntBASIC3.13□□□□□ -1.91
TNFP01375 FABP5P12-201ENST00000515543 389 ntBASIC3.13□□□□□ -1.91
TNFP01375 MIR2276-201ENST00000516886 89 ntBASIC3.13□□□□□ -1.91
TNFP01375 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.13□□□□□ -1.91
TNFP01375 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.13□□□□□ -1.91
TNFP01375 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.13□□□□□ -1.91
TNFP01375 VN1R92P-201ENST00000598511 928 ntBASIC3.13□□□□□ -1.91
TNFP01375 AC123786.2-201ENST00000603459 275 ntBASIC3.13□□□□□ -1.91
TNFP01375 AL513477.2-201ENST00000607858 568 ntBASIC3.13□□□□□ -1.91
TNFP01375 C2orf27A-204ENST00000623058 969 ntBASIC3.13□□□□□ -1.91
TNFP01375 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFP01375 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TNFP01375 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms