Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN9O95484 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN9O95484 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN9O95484 USP9YP5-201ENST00000511770 630 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN9O95484 AL121576.1-201ENST00000556055 276 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN9O95484 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN9O95484 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN9O95484 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN9O95484 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN9O95484 AC093227.2-201ENST00000589357 285 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN9O95484 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN9O95484 ZNF92P2-201ENST00000600543 1059 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN9O95484 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN9O95484 AL118556.2-201ENST00000614375 824 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 RMST_10.1-201ENST00000616309 154 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN9O95484 AC073569.3-201ENST00000619055 682 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 AP006248.3-201ENST00000623580 594 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN9O95484 MIR4496-201ENST00000635896 61 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN9O95484 AP004289.2-201ENST00000444413 1457 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN9O95484 AC046144.1-201ENST00000478559 1853 ntBASIC3.58□□□□□ -1.84
CLDN9O95484 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN9O95484 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN9O95484 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CLDN9O95484 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN9O95484 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN9O95484 RNU6-1339P-201ENST00000363574 91 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 RNU1-64P-201ENST00000365443 163 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 RNU6-650P-201ENST00000365658 111 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN9O95484 MIR134-201ENST00000385258 73 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 SOD2P1-201ENST00000396543 562 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN9O95484 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN9O95484 AC093422.3-201ENST00000428506 305 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 CKS1BP5-201ENST00000434172 273 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 YWHAZP8-201ENST00000436935 731 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 AC004865.1-201ENST00000442276 1003 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN9O95484 NSRP1P1-201ENST00000444067 1693 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN9O95484 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN9O95484 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN9O95484 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 UBDP1-202ENST00000457888 382 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 VN1R105P-201ENST00000486595 910 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDN9O95484 SNX5P1-201ENST00000505757 1041 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN9O95484 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.57□□□□□ -1.84
CLDN9O95484 EXOC5P1-201ENST00000510543 1969 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN9O95484 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN9O95484 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN9O95484 OR7E13P-201ENST00000526052 910 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN9O95484 OR8L1P-201ENST00000534005 955 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.57□□□□□ -1.84
CLDN9O95484 OR8R1P-201ENST00000543943 764 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 AC008011.1-201ENST00000545989 227 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN9O95484 TRAV15-201ENST00000556680 249 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 ATP5F1P7-201ENST00000567330 760 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN9O95484 BNIP3P11-201ENST00000603878 563 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 AC091488.1-201ENST00000604239 660 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN9O95484 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN9O95484 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN9O95484 AL713922.2-201ENST00000619384 716 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN9O95484 AP003400.6-201ENST00000624698 740 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 AC092608.3-201ENST00000625017 386 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLDN9O95484 AL732372.2-225ENST00000642124 456 ntBASIC3.57□□□□□ -1.84
CLDN9O95484 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN9O95484 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN9O95484 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN9O95484 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CLDN9O95484 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN9O95484 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN9O95484 MTND4P10-201ENST00000446199 1363 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 AL122126.1-201ENST00000546905 1318 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN9O95484 SNORA51.12-201ENST00000384448 134 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLDN9O95484 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN9O95484 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN9O95484 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN9O95484 AC006989.1-201ENST00000427212 131 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 RPL7P2-201ENST00000427639 268 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 RPL29P29-201ENST00000448725 423 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms