Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC135721.1-201ENST00000497954 479 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AL049874.4-201ENST00000557593 255 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.39□□□□□ -2.19
USH2AO75445 AC015871.5-202ENST00000623252 701 ntBASIC1.39□□□□□ -2.19
USH2AO75445 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
USH2AO75445 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
USH2AO75445 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
USH2AO75445 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.39□□□□□ -2.19
USH2AO75445 Y_RNA.116-201ENST00000363292 103 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AC004866.2-201ENST00000438285 481 ntBASIC1.39□□□□□ -2.19
USH2AO75445 MOB1AP2-201ENST00000446060 614 ntBASIC1.39□□□□□ -2.19
USH2AO75445 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC1.39□□□□□ -2.19
USH2AO75445 AC034159.1-201ENST00000513885 583 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC1.39□□□□□ -2.19
USH2AO75445 AC099506.2-201ENST00000623074 221 ntBASIC1.39□□□□□ -2.19
USH2AO75445 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
USH2AO75445 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
USH2AO75445 OR4G1P-202ENST00000641173 1788 ntBASIC1.39□□□□□ -2.19
USH2AO75445 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
USH2AO75445 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC1.39□□□□□ -2.19
USH2AO75445 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC1.39□□□□□ -2.19
USH2AO75445 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC1.39□□□□□ -2.19
USH2AO75445 Y_RNA.178-201ENST00000363832 102 ntBASIC1.39□□□□□ -2.19
USH2AO75445 FTLP19-201ENST00000433300 394 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.39□□□□□ -2.19
USH2AO75445 AP001025.2-201ENST00000490908 477 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AP000790.1-201ENST00000528891 737 ntBASIC1.39□□□□□ -2.19
USH2AO75445 NPM1P5-201ENST00000557228 838 ntBASIC1.39□□□□□ -2.19
USH2AO75445 MIR6817-201ENST00000615588 66 ntBASIC1.39□□□□□ -2.19
USH2AO75445 AC022106.2-201ENST00000620114 757 ntBASIC1.39□□□□□ -2.19
USH2AO75445 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
USH2AO75445 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC1.39□□□□□ -2.19
USH2AO75445 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC1.39□□□□□ -2.19
USH2AO75445 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 AC011266.1-201ENST00000624119 3569 ntBASIC1.38□□□□□ -2.19
USH2AO75445 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
USH2AO75445 AC107027.3-201ENST00000565095 3473 ntBASIC1.38□□□□□ -2.19
USH2AO75445 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AL356968.1-201ENST00000416622 474 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AC048351.1-201ENST00000420064 602 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.38□□□□□ -2.19
USH2AO75445 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC1.38□□□□□ -2.19
USH2AO75445 AL031584.1-201ENST00000447169 754 ntBASIC1.38□□□□□ -2.19
USH2AO75445 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.38□□□□□ -2.19
USH2AO75445 SNRPGP5-201ENST00000456003 220 ntBASIC1.38□□□□□ -2.19
USH2AO75445 RPL31P13-201ENST00000484151 370 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AL353997.5-201ENST00000618886 171 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AC007318.2-201ENST00000620999 243 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC1.38□□□□□ -2.19
USH2AO75445 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 SNORD114-30-201ENST00000364448 72 ntBASIC1.38□□□□□ -2.19
USH2AO75445 RN7SKP192-201ENST00000411291 327 ntBASIC1.38□□□□□ -2.19
USH2AO75445 RPL23AP16-201ENST00000441715 421 ntBASIC1.38□□□□□ -2.19
USH2AO75445 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.38□□□□□ -2.19
USH2AO75445 COX6CP8-201ENST00000522620 226 ntBASIC1.38□□□□□ -2.19
USH2AO75445 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.38□□□□□ -2.19
USH2AO75445 AL121766.1-201ENST00000547436 487 ntBASIC1.38□□□□□ -2.19
USH2AO75445 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC1.38□□□□□ -2.19
USH2AO75445 AC007566.2-201ENST00000603642 413 ntBASIC1.38□□□□□ -2.19
USH2AO75445 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 MAPK10-362ENST00000641864 4484 ntBASIC1.38□□□□□ -2.19
USH2AO75445 MIR27B-201ENST00000385129 97 ntBASIC1.38□□□□□ -2.19
USH2AO75445 MTCO3P21-201ENST00000430791 643 ntBASIC1.38□□□□□ -2.19
USH2AO75445 TAF9P1-201ENST00000445421 515 ntBASIC1.38□□□□□ -2.19
USH2AO75445 TAF9P2-201ENST00000454958 515 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AC111000.2-201ENST00000507775 550 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC1.38□□□□□ -2.19
USH2AO75445 LTV1P1-201ENST00000510683 1237 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AC021146.3-201ENST00000511911 260 ntBASIC1.38□□□□□ -2.19
USH2AO75445 APOOP4-201ENST00000513530 597 ntBASIC1.38□□□□□ -2.19
USH2AO75445 SUMO2P20-201ENST00000520803 283 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.38□□□□□ -2.19
USH2AO75445 AC026979.4-201ENST00000606555 645 ntBASIC1.38□□□□□ -2.19
USH2AO75445 AL162574.2-201ENST00000614618 657 ntBASIC1.38□□□□□ -2.19
USH2AO75445 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC1.38□□□□□ -2.19
USH2AO75445 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC1.38□□□□□ -2.19
USH2AO75445 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC1.38□□□□□ -2.19
USH2AO75445 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC1.38□□□□□ -2.19
USH2AO75445 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
USH2AO75445 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC1.38□□□□□ -2.19
USH2AO75445 Y_RNA.595-201ENST00000410403 105 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms