Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 OR6C71P-202ENST00000641886 1107 ntBASIC3.9□□□□□ -1.79
SNX3O60493 MAPK10-372ENST00000641954 3413 ntBASIC3.9□□□□□ -1.79
SNX3O60493 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX3O60493 AL355578.1-201ENST00000607405 1328 ntBASIC3.9□□□□□ -1.79
SNX3O60493 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX3O60493 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX3O60493 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX3O60493 AC099786.3-201ENST00000565735 1410 ntBASIC3.89□□□□□ -1.79
SNX3O60493 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX3O60493 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SNX3O60493 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX3O60493 RNU6-984P-201ENST00000363236 109 ntBASIC3.89□□□□□ -1.79
SNX3O60493 RNU6-1243P-201ENST00000364028 107 ntBASIC3.89□□□□□ -1.79
SNX3O60493 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX3O60493 RNU6-1242P-201ENST00000391052 103 ntBASIC3.89□□□□□ -1.79
SNX3O60493 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SNX3O60493 RNU4-34P-201ENST00000410431 124 ntBASIC3.89□□□□□ -1.79
SNX3O60493 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.89□□□□□ -1.79
SNX3O60493 SSR1P2-201ENST00000415208 787 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SNX3O60493 P2RY10P2-201ENST00000416730 913 ntBASIC3.89□□□□□ -1.79
SNX3O60493 BOLA3P4-201ENST00000418151 400 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AL513175.2-201ENST00000422071 443 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX3O60493 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX3O60493 AC008065.1-201ENST00000428525 348 ntBASIC3.89□□□□□ -1.79
SNX3O60493 CEACAMP7-201ENST00000444105 496 ntBASIC3.89□□□□□ -1.79
SNX3O60493 RPS26P56-201ENST00000444468 240 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX3O60493 HMGN3P1-201ENST00000453847 193 ntBASIC3.89□□□□□ -1.79
SNX3O60493 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX3O60493 AC010326.1-201ENST00000462726 602 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AC087879.1-201ENST00000474343 374 ntBASIC3.89□□□□□ -1.79
SNX3O60493 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SNX3O60493 PPIAP15-201ENST00000479662 484 ntBASIC3.89□□□□□ -1.79
SNX3O60493 NIPA2P2-201ENST00000496376 1083 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AC093720.1-201ENST00000505681 714 ntBASIC3.89□□□□□ -1.79
SNX3O60493 SNX5P1-201ENST00000505757 1041 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX3O60493 RNA5SP49-201ENST00000516450 115 ntBASIC3.89□□□□□ -1.79
SNX3O60493 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX3O60493 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX3O60493 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX3O60493 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX3O60493 TRAV8-5-201ENST00000537369 341 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX3O60493 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX3O60493 AGGF1P8-201ENST00000562979 1000 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX3O60493 MTCYBP28-201ENST00000566728 1132 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX3O60493 AGGF1P6-201ENST00000569213 976 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AC025627.2-201ENST00000576220 160 ntBASIC3.89□□□□□ -1.79
SNX3O60493 MIR4738-201ENST00000579134 87 ntBASIC3.89□□□□□ -1.79
SNX3O60493 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX3O60493 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX3O60493 AL592295.2-201ENST00000612578 206 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AL512624.1-201ENST00000613638 469 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AC008121.2-201ENST00000614647 523 ntBASIC3.89□□□□□ -1.79
SNX3O60493 AF001550.2-201ENST00000636643 217 ntBASIC3.89□□□□□ -1.79
SNX3O60493 FAM157B-203ENST00000639350 358 ntBASIC3.89□□□□□ -1.79
SNX3O60493 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SNX3O60493 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SNX3O60493 MTND5P28-201ENST00000438005 1594 ntBASIC3.89□□□□□ -1.79
SNX3O60493 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SNX3O60493 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX3O60493 AL158163.1-201ENST00000603915 1649 ntBASIC3.88□□□□□ -1.79
SNX3O60493 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
SNX3O60493 CEP170P1-201ENST00000502249 4587 ntBASIC3.88□□□□□ -1.79
SNX3O60493 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX3O60493 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SNX3O60493 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SNX3O60493 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.88□□□□□ -1.79
SNX3O60493 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
SNX3O60493 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SNX3O60493 AC103591.2-201ENST00000265259 766 ntBASIC3.88□□□□□ -1.79
SNX3O60493 RNU6-441P-201ENST00000384545 106 ntBASIC3.88□□□□□ -1.79
SNX3O60493 MIR184-201ENST00000384962 84 ntBASIC3.88□□□□□ -1.79
SNX3O60493 RNU6-1300P-201ENST00000391046 108 ntBASIC3.88□□□□□ -1.79
SNX3O60493 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX3O60493 AL592310.1-201ENST00000414330 671 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX3O60493 RPL23AP27-201ENST00000415161 451 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AC007435.1-201ENST00000421086 415 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SNX3O60493 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX3O60493 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX3O60493 B3GNT2P1-201ENST00000434960 952 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX3O60493 NANOGP10-201ENST00000453325 895 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX3O60493 RPL7P1-201ENST00000468161 747 ntBASIC3.88□□□□□ -1.79
SNX3O60493 RPL7P9-201ENST00000468715 747 ntBASIC3.88□□□□□ -1.79
SNX3O60493 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX3O60493 RN7SL629P-201ENST00000489622 285 ntBASIC3.88□□□□□ -1.79
SNX3O60493 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
SNX3O60493 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX3O60493 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SNX3O60493 AC016065.2-201ENST00000514530 444 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms