Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MTND4P31-201ENST00000425607 1343 ntBASIC3.91□□□□□ -1.78
MSH4O15457 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.91□□□□□ -1.78
MSH4O15457 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
MSH4O15457 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
MSH4O15457 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
MSH4O15457 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
MSH4O15457 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
MSH4O15457 AL356274.2-201ENST00000624379 3752 ntBASIC3.9□□□□□ -1.78
MSH4O15457 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MSH4O15457 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MSH4O15457 RNU6-252P-201ENST00000363232 107 ntBASIC3.9□□□□□ -1.79
MSH4O15457 RNA5SP50-201ENST00000363731 107 ntBASIC3.9□□□□□ -1.79
MSH4O15457 RNU6-98P-201ENST00000384173 107 ntBASIC3.9□□□□□ -1.79
MSH4O15457 TATDN1P1-201ENST00000414123 891 ntBASIC3.9□□□□□ -1.79
MSH4O15457 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.9□□□□□ -1.79
MSH4O15457 AP000907.1-201ENST00000428428 510 ntBASIC3.9□□□□□ -1.79
MSH4O15457 RPL7P29-201ENST00000437151 728 ntBASIC3.9□□□□□ -1.79
MSH4O15457 AC069540.1-201ENST00000446320 988 ntBASIC3.9□□□□□ -1.79
MSH4O15457 CYCSP35-201ENST00000451978 304 ntBASIC3.9□□□□□ -1.79
MSH4O15457 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.9□□□□□ -1.79
MSH4O15457 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.9□□□□□ -1.79
MSH4O15457 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MSH4O15457 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.9□□□□□ -1.79
MSH4O15457 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.9□□□□□ -1.79
MSH4O15457 AC087272.1-201ENST00000523624 533 ntBASIC3.9□□□□□ -1.79
MSH4O15457 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.9□□□□□ -1.79
MSH4O15457 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.9□□□□□ -1.79
MSH4O15457 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.9□□□□□ -1.79
MSH4O15457 MIR5186-201ENST00000577504 120 ntBASIC3.9□□□□□ -1.79
MSH4O15457 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.9□□□□□ -1.79
MSH4O15457 AC079610.2-201ENST00000604818 690 ntBASIC3.9□□□□□ -1.79
MSH4O15457 AC011374.2-201ENST00000607135 526 ntBASIC3.9□□□□□ -1.79
MSH4O15457 AL355365.1-201ENST00000616480 294 ntBASIC3.9□□□□□ -1.79
MSH4O15457 AC004777.1-201ENST00000624317 287 ntBASIC3.9□□□□□ -1.79
MSH4O15457 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.9□□□□□ -1.79
MSH4O15457 CFTRP2-201ENST00000634304 199 ntBASIC3.9□□□□□ -1.79
MSH4O15457 FRG1DP-201ENST00000635586 771 ntBASIC3.9□□□□□ -1.79
MSH4O15457 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
MSH4O15457 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.9□□□□□ -1.79
MSH4O15457 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
MSH4O15457 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MSH4O15457 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.89□□□□□ -1.79
MSH4O15457 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MSH4O15457 METTL21EP-201ENST00000298105 713 ntBASIC3.89□□□□□ -1.79
MSH4O15457 SNORA63.1-201ENST00000362493 131 ntBASIC3.89□□□□□ -1.79
MSH4O15457 RNA5SP44-201ENST00000410446 133 ntBASIC3.89□□□□□ -1.79
MSH4O15457 HSFY4P-201ENST00000415994 1181 ntBASIC3.89□□□□□ -1.79
MSH4O15457 AL357078.2-201ENST00000416486 427 ntBASIC3.89□□□□□ -1.79
MSH4O15457 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.89□□□□□ -1.79
MSH4O15457 AC097713.2-201ENST00000430199 356 ntBASIC3.89□□□□□ -1.79
MSH4O15457 RPL7P4-203ENST00000430239 730 ntBASIC3.89□□□□□ -1.79
MSH4O15457 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.89□□□□□ -1.79
MSH4O15457 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.89□□□□□ -1.79
MSH4O15457 AC026784.1-201ENST00000507986 352 ntBASIC3.89□□□□□ -1.79
MSH4O15457 IGLVIV-53-201ENST00000520107 367 ntBASIC3.89□□□□□ -1.79
MSH4O15457 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.89□□□□□ -1.79
MSH4O15457 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.89□□□□□ -1.79
MSH4O15457 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.89□□□□□ -1.79
MSH4O15457 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.89□□□□□ -1.79
MSH4O15457 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.89□□□□□ -1.79
MSH4O15457 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.89□□□□□ -1.79
MSH4O15457 MIR4512-201ENST00000583257 77 ntBASIC3.89□□□□□ -1.79
MSH4O15457 BNIP3P38-201ENST00000601117 544 ntBASIC3.89□□□□□ -1.79
MSH4O15457 KATNBL1P5-201ENST00000605015 517 ntBASIC3.89□□□□□ -1.79
MSH4O15457 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.89□□□□□ -1.79
MSH4O15457 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MSH4O15457 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.89□□□□□ -1.79
MSH4O15457 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.89□□□□□ -1.79
MSH4O15457 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSH4O15457 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
MSH4O15457 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSH4O15457 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSH4O15457 MIR208A-201ENST00000362287 71 ntBASIC3.88□□□□□ -1.79
MSH4O15457 RNU1-33P-201ENST00000364249 162 ntBASIC3.88□□□□□ -1.79
MSH4O15457 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSH4O15457 AC234772.1-201ENST00000377927 937 ntBASIC3.88□□□□□ -1.79
MSH4O15457 RSL24D1P1-201ENST00000404972 493 ntBASIC3.88□□□□□ -1.79
MSH4O15457 RN7SKP111-201ENST00000410349 271 ntBASIC3.88□□□□□ -1.79
MSH4O15457 VTA1P1-201ENST00000414044 866 ntBASIC3.88□□□□□ -1.79
MSH4O15457 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.88□□□□□ -1.79
MSH4O15457 AC002075.2-201ENST00000425207 252 ntBASIC3.88□□□□□ -1.79
MSH4O15457 AC006946.1-201ENST00000429106 328 ntBASIC3.88□□□□□ -1.79
MSH4O15457 RPL7P28-201ENST00000437739 740 ntBASIC3.88□□□□□ -1.79
MSH4O15457 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.88□□□□□ -1.79
MSH4O15457 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.88□□□□□ -1.79
MSH4O15457 RPS29P31-201ENST00000446147 164 ntBASIC3.88□□□□□ -1.79
MSH4O15457 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.88□□□□□ -1.79
MSH4O15457 AC092685.1-201ENST00000447960 1243 ntBASIC3.88□□□□□ -1.79
MSH4O15457 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
MSH4O15457 snoU13.22-201ENST00000459428 104 ntBASIC3.88□□□□□ -1.79
MSH4O15457 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.88□□□□□ -1.79
MSH4O15457 RPS4XP10-201ENST00000465034 731 ntBASIC3.88□□□□□ -1.79
MSH4O15457 FCF1P3-201ENST00000496394 590 ntBASIC3.88□□□□□ -1.79
MSH4O15457 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.88□□□□□ -1.79
MSH4O15457 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.88□□□□□ -1.79
MSH4O15457 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.88□□□□□ -1.79
MSH4O15457 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.88□□□□□ -1.79
MSH4O15457 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.88□□□□□ -1.79
MSH4O15457 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.88□□□□□ -1.79
MSH4O15457 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms