Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC244505.3-201ENST00000454598 187 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A1O00337 AC104057.1-201ENST00000515547 497 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 snoZ278.1-201ENST00000517059 112 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A1O00337 AC104417.1-201ENST00000523974 751 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A1O00337 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A1O00337 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC28A1O00337 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC28A1O00337 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A1O00337 MIR4330-201ENST00000579077 105 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC28A1O00337 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A1O00337 AL009028.1-201ENST00000604895 802 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC28A1O00337 LINC00561-201ENST00000565815 2738 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A1O00337 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC28A1O00337 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A1O00337 PABPC1P7-201ENST00000413177 1513 ntBASIC3.79□□□□□ -1.8
SLC28A1O00337 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A1O00337 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A1O00337 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A1O00337 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A1O00337 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC28A1O00337 RNU6-1226P-201ENST00000384317 107 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AC096533.1-201ENST00000411645 353 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC016397.1-201ENST00000412463 242 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.78□□□□□ -1.8
SLC28A1O00337 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.78□□□□□ -1.8
SLC28A1O00337 IFNNP1-201ENST00000429219 553 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A1O00337 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC28A1O00337 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC010307.1-201ENST00000467206 836 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AL132838.2-201ENST00000492041 314 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AC008837.1-201ENST00000511513 412 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC28A1O00337 OR4A12P-201ENST00000530847 918 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC28A1O00337 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC28A1O00337 MIR3138-201ENST00000585238 82 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC090330.1-201ENST00000588646 764 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AC068790.4-201ENST00000602474 263 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC28A1O00337 MIR6820-201ENST00000611508 62 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AL109620.1-201ENST00000618738 1197 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 AC004943.3-201ENST00000624116 600 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC28A1O00337 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A1O00337 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AP002001.2-201ENST00000529025 1469 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC28A1O00337 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC28A1O00337 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A1O00337 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A1O00337 AC026951.1-201ENST00000559530 2459 ntBASIC3.78□□□□□ -1.8
SLC28A1O00337 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
SLC28A1O00337 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SLC28A1O00337 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SLC28A1O00337 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.77□□□□□ -1.81
SLC28A1O00337 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SLC28A1O00337 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC28A1O00337 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC28A1O00337 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC28A1O00337 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC28A1O00337 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC28A1O00337 RNU6-921P-201ENST00000384361 107 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.77□□□□□ -1.81
SLC28A1O00337 AL121978.1-201ENST00000402778 359 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 AL139098.1-201ENST00000407291 389 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 BTF3P8-201ENST00000414577 526 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 RPL26P29-201ENST00000415623 438 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 AC027644.1-201ENST00000419595 298 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 AC092634.2-201ENST00000428146 1010 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 AC114973.1-201ENST00000429057 632 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 B3GNT2P1-201ENST00000434960 952 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 CEACAMP9-201ENST00000442990 513 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC28A1O00337 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.77□□□□□ -1.81
SLC28A1O00337 AC098824.1-201ENST00000453565 980 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 SBDSP1-204ENST00000453858 737 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 GAPDHP39-201ENST00000481866 979 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 AC069306.1-201ENST00000507006 843 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 RNA5SP135-201ENST00000517019 125 ntBASIC3.77□□□□□ -1.81
SLC28A1O00337 RNA5SP179-201ENST00000517284 121 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms